C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytohesin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446868 CYTH1-001 ENSG00000108669 9606 - 17:78674048-78782294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000446868
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000446868 8.327±0.00 23.817±0.00 7.543±6.28 2.466±0.45 3.296±1.90 3.090±2.38 1.204±0.00 1.544±0.13 8.093±3.39 5.922±0.00 3.336±1.45 5.945±0.68 1.902±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062H CIL_00062H_0001 CGP 17:78423697-78782297
CIL_00062I CIL_00062I_0001 CGP 17:78674048-78841441

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IEA:IBA ARF guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 ISS cytosol
GO:0005886 IDA plasma membrane
GO:0008289 IEA lipid binding
GO:0030155 IDA regulation of cell adhesion
GO:0031234 ISS extrinsic component of cytoplasmic side of plasma membrane
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106305 Cyth1-202 protein_coding Mus_musculus 0 1506
ENSMUST00000017276 Cyth1-001 protein_coding Mus_musculus 0 1485
ENSMUST00000106302 Cyth1-201 protein_coding Mus_musculus 0 1469
ENSMUST00000100181 Cyth1-002 protein_coding Mus_musculus 0 1373
ENSMUST00000141243 Cyth1-005 processed_transcript Mus_musculus 0 542
ENSMUST00000131115 Cyth1-004 processed_transcript Mus_musculus 0 407
ENSMUST00000151165 Cyth1-003 protein_coding Mus_musculus 0 387

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