C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium channel tetramerization domain containing 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110906 KCTD10 9606 - 12:109448656-109477544 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000228495 KCTD10-001 109448656-109477544 protein_coding
  ENST00000440541 KCTD10-002 109449971-109477359 nonsense_mediated_decay
  ENST00000535546 KCTD10-012 109451634-109458982 protein_coding
  ENST00000535747 KCTD10-010 109460326-109477300 retained_intron
  ENST00000537165 KCTD10-003 109451287-109477300 nonsense_mediated_decay
  ENST00000538161 KCTD10-005 109451404-109464895 processed_transcript
  ENST00000538377 KCTD10-009 109469062-109477300 retained_intron
  ENST00000540089 KCTD10-007 109449961-109458985 protein_coding
  ENST00000540355 KCTD10-013 109451682-109458871 protein_coding
  ENST00000540402 KCTD10-014 109451641-109457975 retained_intron
  ENST00000540411 KCTD10-004 109451595-109469724 protein_coding
  ENST00000541077 KCTD10-008 109456222-109477289 nonsense_mediated_decay
  ENST00000542262 KCTD10-016 109456243-109477305 protein_coding
  ENST00000542858 KCTD10-015 109456285-109477300 protein_coding
  ENST00000542954 KCTD10-011 109451630-109460395 protein_coding
  ENST00000545759 KCTD10-006 109449971-109459629 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000228495ENST00000440541
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000228495 23.375±0.00 19.343±0.00 6.311±0.00 5.822±3.12 10.713±0.00 4.149±3.10 1.918±0.00 2.296±0.00 11.131±7.91 3.383±0.00 8.966±5.58 7.090±1.38 7.972±2.20
ENST00000440541 16.623±0.00 9.215±0.00 N/A 12.723±0.00 8.761±0.00 N/A N/A 1.757±0.00 N/A N/A 10.217±0.00 12.961±3.50 11.686±3.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VO CIL_0001VO_0001 CGP 12:109277979-109455523
CIL_0001GP CIL_0001GP_0002 CGP 12:109347903-109477544
CIL_0001GM CIL_0001GM_0002 CGP 12:109448656-109536705

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016567 ISS protein ubiquitination
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0036038 IEA TCTN-B9D complex
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017115 kctd10 potassium channel tetramerisation domain containing 10 protein_coding Danio_rerio
ENSMUSG00000001098 Kctd10 potassium channel tetramerisation domain containing 10 protein_coding Mus_musculus

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