C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerization domain containing 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000228495 KCTD10-001 ENSG00000110906 9606 - 12:109448656-109477544 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000228495
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000228495 23.375±0.00 19.343±0.00 6.311±0.00 5.822±3.12 10.713±0.00 4.149±3.10 1.918±0.00 2.296±0.00 11.131±7.91 3.383±0.00 8.966±5.58 7.090±1.38 7.972±2.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VO CIL_0001VO_0001 CGP 12:109277979-109455523
CIL_0001GP CIL_0001GP_0002 CGP 12:109347903-109477544
CIL_0001GM CIL_0001GM_0002 CGP 12:109448656-109536705

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016567 ISS protein ubiquitination
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0036038 IEA TCTN-B9D complex
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102581 Kctd10-001 protein_coding Mus_musculus 0 1465
ENSMUST00000001125 Kctd10-002 protein_coding Mus_musculus 0 1269
ENSMUST00000134532 Kctd10-003 nonsense_mediated_decay Mus_musculus 0 832
ENSMUST00000134173 Kctd10-004 processed_transcript Mus_musculus 0 821
ENSMUST00000135170 Kctd10-006 retained_intron Mus_musculus 0 586
ENSMUST00000123538 Kctd10-005 retained_intron Mus_musculus 0 405
ENSMUST00000132646 Kctd10-007 retained_intron Mus_musculus 0 309

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