C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0001VO_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000139445-ENSG00000174527 | CGP | 9606 | 12:109277979-109455523  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000110906  (KCTD10)potassium channel tetramerization domain containing 10 |
ENST00000228495 (KCTD10-001)
|
109448656-109477544 | protein_coding | |
|
ENST00000440541 (KCTD10-002)
|
109449971-109477359 | nonsense_mediated_decay | ||
|
ENST00000535546 (KCTD10-012)
|
109451634-109458982 | protein_coding | ||
|
ENST00000535747 (KCTD10-010)
|
109460326-109477300 | retained_intron | ||
|
ENST00000537165 (KCTD10-003)
|
109451287-109477300 | nonsense_mediated_decay | ||
|
ENST00000538161 (KCTD10-005)
|
109451404-109464895 | processed_transcript | ||
|
ENST00000538377 (KCTD10-009)
|
109469062-109477300 | retained_intron | ||
|
ENST00000540089 (KCTD10-007)
|
109449961-109458985 | protein_coding | ||
|
ENST00000540355 (KCTD10-013)
|
109451682-109458871 | protein_coding | ||
|
ENST00000540402 (KCTD10-014)
|
109451641-109457975 | retained_intron | ||
|
ENST00000540411 (KCTD10-004)
|
109451595-109469724 | protein_coding | ||
|
ENST00000541077 (KCTD10-008)
|
109456222-109477289 | nonsense_mediated_decay | ||
|
ENST00000542262 (KCTD10-016)
|
109456243-109477305 | protein_coding | ||
|
ENST00000542858 (KCTD10-015)
|
109456285-109477300 | protein_coding | ||
|
ENST00000542954 (KCTD10-011)
|
109451630-109460395 | protein_coding | ||
|
ENST00000545759 (KCTD10-006)
|
109449971-109459629 | retained_intron | ||
|
ENSG00000139445 (FOXN4) forkhead box N4 |
ENST00000299162 (FOXN4-001)
|
109277980-109309220 | protein_coding | |
|
ENST00000355216 (FOXN4-002)
|
109277979-109309220 | protein_coding | ||
|
ENST00000423960 (FOXN4-004)
|
109279761-109290252 | nonsense_mediated_decay | ||
|
ENST00000468516 (FOXN4-005)
|
109277979-109286723 | protein_coding | ||
|
ENSG00000174527 (MYO1H) myosin IH |
ENST00000310903 (MYO1H-001)
|
109347903-109448371 | protein_coding | |
|
ENST00000431443 (MYO1H-201)
|
109388719-109448371 | protein_coding | ||
|
ENST00000457826 (MYO1H-005)
|
109440567-109443670 | retained_intron | ||
|
ENST00000542268 (MYO1H-003)
|
109439537-109447455 | retained_intron | ||
|
ENST00000542883 (MYO1H-004)
|
109401405-109407881 | processed_transcript | ||
|
ENST00000543960 (MYO1H-006)
|
109443562-109455523 | nonsense_mediated_decay | ||
|
ENSG00000255655 (RP11-256L11.3) |
ENST00000539987 (RP11-256L11.3-001)
|
109445410-109447497 | antisense | |
|
ENSG00000256560 (LINC01486) long intergenic non-protein coding RNA 1486 |
ENST00000538041 (LINC01486-001)
|
109354083-109359488 | lincRNA | |
| CIL_0001VO_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000042002-ENSMUSG00000066952 | CGP | 10090 | 5:114254164-114364576 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000042002 (Foxn4) forkhead box N4 |
ENSMUST00000044790 (Foxn4-001)
|
114254164-114273807 | protein_coding | |
|
ENSMUST00000129530 (Foxn4-002)
|
114255581-114263120 | nonsense_mediated_decay | ||
|
ENSMUST00000144050 (Foxn4-003)
|
114260356-114273702 | protein_coding | ||
|
ENSMUST00000147953 (Foxn4-004)
|
114262706-114273749 | retained_intron | ||
Expression Patterns
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