C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerization domain containing 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440541 KCTD10-002 ENSG00000110906 9606 - 12:109449971-109477359 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverOvaryPlacentaTestisENST00000440541
Transcript ID Adipose Adrenal Breast Colon Liver Ovary Placenta Testis
ENST00000440541 16.623±0.00 9.215±0.00 12.723±0.00 8.761±0.00 1.757±0.00 10.217±0.00 12.961±3.50 11.686±3.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VO CIL_0001VO_0001 CGP 12:109277979-109455523
CIL_0001GP CIL_0001GP_0002 CGP 12:109347903-109477544
CIL_0001GM CIL_0001GM_0002 CGP 12:109448656-109536705

Gene Ontology

GO IDEvidence TypeGO Description
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134532 Kctd10-003 nonsense_mediated_decay Mus_musculus 0 1225
ENSMUST00000102581 Kctd10-001 protein_coding Mus_musculus 0 832
ENSMUST00000001125 Kctd10-002 protein_coding Mus_musculus 0 686
ENSMUST00000134173 Kctd10-004 processed_transcript Mus_musculus 0 599
ENSMUST00000123538 Kctd10-005 retained_intron Mus_musculus 0 409
ENSMUST00000135170 Kctd10-006 retained_intron Mus_musculus 0 405
ENSMUST00000132646 Kctd10-007 retained_intron Mus_musculus 0 309

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