C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium channel tetramerisation domain containing 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001098 Kctd10 10090 - 5:114363567-114380515 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001125 Kctd10-002 114365622-114380483 protein_coding
  ENSMUST00000102581 Kctd10-001 114363567-114380515 protein_coding
  ENSMUST00000123538 Kctd10-005 114366984-114369252 retained_intron
  ENSMUST00000132646 Kctd10-007 114366883-114368669 retained_intron
  ENSMUST00000134173 Kctd10-004 114365706-114372142 processed_transcript
  ENSMUST00000134532 Kctd10-003 114364462-114380489 nonsense_mediated_decay
  ENSMUST00000135170 Kctd10-006 114366903-114370207 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102581ENSMUST00000134532
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102581 51.478±1.84 43.672±1.98 56.904±5.03 19.376±12.32 36.590±13.73 77.822±6.00 18.845±1.44 26.683±1.50 9.653±2.78 155.303±8.99 5.123±0.77 59.138±18.94 53.452±26.69 23.070±10.49
ENSMUST00000134532 N/A N/A N/A 15.587±0.00 N/A N/A N/A N/A N/A N/A N/A 38.721±0.00 68.298±6.30 19.084±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VO CIL_0001VO_0002 CGP 5:114254164-114364576
CIL_0001GP CIL_0001GP_0003 CGP 5:114314941-114380515
CIL_0001GM CIL_0001GM_0003 CGP 5:114363567-114421168

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0016567 ISS protein ubiquitination
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0036038 IDA TCTN-B9D complex
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017115 kctd10 potassium channel tetramerisation domain containing 10 protein_coding Danio_rerio
ENSG00000110906 KCTD10 potassium channel tetramerization domain containing 10 protein_coding Homo_sapiens

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