C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113532 ST8SIA4 9606 - 5:100806935-100903266 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000231461 ST8SIA4-001 100806935-100903266 protein_coding
  ENST00000451528 ST8SIA4-002 100885311-100903214 protein_coding
  ENST00000507360 ST8SIA4-004 100886352-100890882 processed_transcript
  ENST00000523381 ST8SIA4-003 100895662-100903224 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000231461ENST00000451528
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000231461 3.318±0.00 2.350±0.00 0.504±0.00 1.131±0.47 2.168±0.20 0.931±0.28 0.667±0.14 0.601±0.22 0.900±0.63 3.415±0.75 0.170±0.15 0.585±0.26 2.335±0.70 0.383±0.22
ENST00000451528 N/A N/A 0.545±0.00 N/A 1.608±0.00 1.751±0.00 0.483±0.00 N/A 0.886±0.00 N/A 0.368±0.00 0.606±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z8 CIL_0004Z8_0001 CGP 5:100535305-100903266
CIL_0004ZB CIL_0004ZB_0001 CGP 5:100806935-102296549

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001574 IDA ganglioside biosynthetic process
GO:0003828 IDA alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity
GO:0006464 TAS cellular protein modification process
GO:0006486 IDA:IEA protein glycosylation
GO:0006491 IDA N-glycan processing
GO:0007399 TAS nervous system development
GO:0007411 TAS axon guidance
GO:0008373 IEA sialyltransferase activity
GO:0009311 IDA oligosaccharide metabolic process
GO:0030173 IEA integral component of Golgi membrane
GO:0033691 IC sialic acid binding
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018699 st8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein_coding Danio_rerio
ENSMUSG00000040710 St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein_coding Mus_musculus

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