C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000451528 ST8SIA4-002 ENSG00000113532 9606 - 5:100885311-100903214 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverMuscleOvaryENST00000451528
Transcript ID Bladder Breast Colon Heart Liver Muscle Ovary
ENST00000451528 0.545±0.00 1.608±0.00 1.751±0.00 0.483±0.00 0.886±0.00 0.368±0.00 0.606±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z8 CIL_0004Z8_0001 CGP 5:100535305-100903266
CIL_0004ZB CIL_0004ZB_0001 CGP 5:100806935-102296549

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001574 IDA ganglioside biosynthetic process
GO:0003828 IDA alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity
GO:0006464 TAS cellular protein modification process
GO:0006486 IDA:IEA protein glycosylation
GO:0006491 IDA N-glycan processing
GO:0007399 TAS nervous system development
GO:0007411 TAS axon guidance
GO:0008373 IEA sialyltransferase activity
GO:0009311 IDA oligosaccharide metabolic process
GO:0030173 IEA integral component of Golgi membrane
GO:0033691 IC sialic acid binding
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189556 St8sia4-004 protein_coding Mus_musculus 0 863
ENSMUST00000043336 St8sia4-001 protein_coding Mus_musculus 0 863
ENSMUST00000187936 St8sia4-002 retained_intron Mus_musculus 0 494
ENSMUST00000186853 St8sia4-003 retained_intron Mus_musculus 0 359

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