C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004Z8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174132-ENSG00000113532 CGP 9606 5:100535305-100903266
GeneTranscriptPositionBiotype
ENSG00000113532 (ST8SIA4)
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
ENST00000231461 (ST8SIA4-001) 100806935-100903266 protein_coding
ENST00000451528 (ST8SIA4-002) 100885311-100903214 protein_coding
ENST00000507360 (ST8SIA4-004) 100886352-100890882 processed_transcript
ENST00000523381 (ST8SIA4-003) 100895662-100903224 nonsense_mediated_decay
ENSG00000174132 (FAM174A)
family with sequence similarity 174, member A
ENST00000312637 (FAM174A-001) 100535305-100586741 protein_coding
ENST00000505792 (FAM174A-004) 100562052-100586729 processed_transcript
ENST00000509040 (FAM174A-002) 100535382-100586228 processed_transcript
ENSG00000221263 (MIR548P)
microRNA 548p
ENST00000408336 (MIR548P-201) 100816482-100816565 miRNA
ENSG00000250806 (CTC-293G12.1)
ENST00000511592 (CTC-293G12.1-001) 100654112-100657970 lincRNA
CIL_0004Z8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051185-ENSMUSG00000040710 CGP 10090 1:95313623-95667571
GeneTranscriptPositionBiotype
ENSMUSG00000040710 (St8sia4)
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
ENSMUST00000043336 (St8sia4-001) 95587682-95667571 protein_coding
ENSMUST00000186853 (St8sia4-003) 95663954-95667565 retained_intron
ENSMUST00000187936 (St8sia4-002) 95658314-95667568 retained_intron
ENSMUST00000189556 (St8sia4-004) 95618551-95667535 protein_coding
ENSMUSG00000051185 (Fam174a)
family with sequence similarity 174, member A
ENSMUST00000059975 (Fam174a-001) 95313623-95335284 protein_coding
ENSMUST00000186780 (Fam174a-002) 95313628-95327945 protein_coding
ENSMUSG00000081051 (Gm15427)
predicted pseudogene 15427
ENSMUST00000117288 (Gm15427-001) 95498621-95499151 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Z8_0001ENSG00000113532ENST00000231461ENST00000451528ENST00000507360ENST00000523381ENSG00000174132ENST00000312637ENST00000505792ENST00000509040ENSG00000221263ENST00000408336ENSG00000250806ENST00000511592CIL_0004Z8_0002ENSMUSG00000040710ENSMUST00000043336ENSMUST00000186853ENSMUST00000187936ENSMUST00000189556ENSMUSG00000051185ENSMUST00000059975ENSMUST00000186780ENSMUSG00000081051ENSMUST00000117288
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Z8_0001ENSG00000113532ENST00000231461ENST00000451528ENSG00000174132ENST00000312637ENST00000505792ENST00000509040ENSG00000221263ENST00000408336ENSG00000250806ENST00000511592CIL_0004Z8_0002ENSMUSG00000040710ENSMUST00000043336ENSMUST00000186853ENSMUST00000187936ENSMUST00000189556ENSMUSG00000051185ENSMUST00000059975ENSMUST00000186780ENSMUSG00000081051ENSMUST00000117288
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113532 ENST00000231461 3.318±0.00 2.350±0.00 0.504±0.00 1.131±0.47 2.168±0.20 0.931±0.28 0.667±0.14 0.601±0.22 0.900±0.63 3.415±0.75 0.170±0.15 0.585±0.26 2.335±0.70 0.383±0.22
ENST00000451528 N/A N/A 0.545±0.00 N/A 1.608±0.00 1.751±0.00 0.483±0.00 N/A 0.886±0.00 N/A 0.368±0.00 0.606±0.00 N/A N/A
ENST00000507360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174132 ENST00000312637 6.828±0.00 5.899±0.00 2.972±0.00 12.338±5.13 5.481±3.89 4.478±2.30 3.505±2.06 6.879±3.91 4.015±0.61 7.822±5.83 4.107±0.72 6.316±3.19 9.190±2.39 41.255±24.95
ENST00000505792 N/A 1.223±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509040 N/A N/A N/A N/A N/A N/A N/A 2.719±0.00 N/A 19.334±0.00 N/A N/A 6.259±0.00 N/A
ENSG00000221263 ENST00000408336 N/A 1.415±0.00 N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250806 ENST00000511592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040710 ENSMUST00000043336 1.953±0.24 0.365±0.19 1.083±0.02 4.984±3.05 2.939±0.64 0.363±0.19 1.120±0.10 0.436±0.12 0.417±0.33 5.651±0.51 0.537±0.10 0.657±0.30 0.405±0.14 0.028±0.02
ENSMUST00000186853 N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 0.028±0.01 N/A N/A 0.145±0.06 N/A 0.025±0.00
ENSMUST00000187936 N/A 1.861±0.56 N/A N/A 6.852±1.10 0.467±0.13 N/A N/A N/A N/A N/A 0.680±0.34 N/A N/A
ENSMUST00000189556 N/A 0.139±0.05 N/A N/A N/A 0.048±0.02 N/A 0.084±0.00 0.052±0.03 N/A N/A 0.065±0.03 N/A 0.040±0.02
ENSMUSG00000051185 ENSMUST00000059975 14.150±2.80 84.433±23.64 11.072±1.09 12.864±13.16 22.312±14.37 22.981±4.81 9.069±2.10 16.184±4.51 5.201±2.05 34.120±9.63 12.056±4.16 18.585±11.51 5.605±2.44 18.922±6.47
ENSMUST00000186780 N/A N/A N/A N/A 0.507±0.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081051 ENSMUST00000117288 115.549±20.99 41.433±7.99 82.200±4.10 41.187±4.55 240.096±122.84 148.803±53.26 43.822±3.91 62.153±33.82 32.916±24.87 115.082±26.51 2.735±0.64 392.587±319.20 17.343±12.12 30.211±16.06

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