C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004ZB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000113532-ENSG00000173930 CGP 9606 5:100806935-102296549
GeneTranscriptPositionBiotype
ENSG00000113532 (ST8SIA4)
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 		ENST00000231461 (ST8SIA4-001) 100806935-100903266 protein_coding
ENST00000451528 (ST8SIA4-002) 100885311-100903214 protein_coding
ENST00000507360 (ST8SIA4-004) 100886352-100890882 processed_transcript
ENST00000523381 (ST8SIA4-003) 100895662-100903224 nonsense_mediated_decay
ENSG00000173930 (SLCO4C1)
solute carrier organic anion transporter family, member 4C1 		ENST00000310954 (SLCO4C1-001) 102233986-102296549 protein_coding
ENSG00000221263 (MIR548P)
microRNA 548p 		ENST00000408336 (MIR548P-201) 100816482-100816565 miRNA
ENSG00000248261 (CTD-2333K2.1)
 ENST00000506058 (CTD-2333K2.1-001) 102144077-102146572 lincRNA
ENSG00000251261 (OR7H2P)
olfactory receptor, family 7, subfamily H, member 2 pseudogene 		ENST00000513483 (OR7H2P-001) 101816475-101816780 unprocessed_pseudogene
ENSG00000277506 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000577858 (Metazoa_SRP.1-433) 101581830-101582128 misc_RNA
CIL_0004ZB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040710-ENSMUSG00000040693 CGP 10090 1:95587682-96872171
GeneTranscriptPositionBiotype
ENSMUSG00000040693 (Slco4c1)
solute carrier organic anion transporter family, member 4C1 		ENSMUST00000071985 (Slco4c1-001) 96816270-96872171 protein_coding
ENSMUSG00000040710 (St8sia4)
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 		ENSMUST00000043336 (St8sia4-001) 95587682-95667571 protein_coding
ENSMUST00000186853 (St8sia4-003) 95663954-95667565 retained_intron
ENSMUST00000187936 (St8sia4-002) 95658314-95667568 retained_intron
ENSMUST00000189556 (St8sia4-004) 95618551-95667535 protein_coding
ENSMUSG00000095955 (Gm22360)
predicted gene, 22360 		ENSMUST00000179775 (Gm22360-201) 95832129-95832235 snRNA
ENSMUSG00000097814 (Panct2)
pluripotency-associated noncoding transcript 2 		ENSMUST00000181489 (Panct2-001) 96872221-96881234 antisense
ENSMUST00000188631 (Panct2-002) 96871126-96877901 antisense
ENSMUSG00000100062 (RP24-348G21.1)
RIKEN cDNA 1700063A18 gene 		ENSMUST00000190901 (RP24-348G21.1-001) 95990659-96021758 lincRNA
ENSMUSG00000100336 (RP23-168P24.1)
predicted gene 29601 		ENSMUST00000187961 (RP23-168P24.1-001) 96543059-96556703 lincRNA
ENSMUSG00000100362 (RP24-512M8.1)
predicted gene 1833 		ENSMUST00000191608 (RP24-512M8.1-001) 96645420-96646170 processed_pseudogene
ENSMUSG00000100589 (RP23-168P24.2)
RIKEN cDNA 4930533P14 gene 		ENSMUST00000189056 (RP23-168P24.2-001) 96612057-96662573 lincRNA
ENSMUSG00000100777 (RP23-288O15.1)
RIKEN cDNA 4930598F16 gene 		ENSMUST00000187352 (RP23-288O15.1-001) 95701184-95716518 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ZB_0001ENSG00000113532ENST00000231461ENST00000451528ENST00000507360ENST00000523381ENSG00000173930ENST00000310954ENSG00000221263ENST00000408336ENSG00000248261ENST00000506058ENSG00000251261ENST00000513483ENSG00000277506ENST00000577858CIL_0004ZB_0002ENSMUSG00000040693ENSMUST00000071985ENSMUSG00000040710ENSMUST00000043336ENSMUST00000186853ENSMUST00000187936ENSMUST00000189556ENSMUSG00000095955ENSMUST00000179775ENSMUSG00000097814ENSMUST00000181489ENSMUST00000188631ENSMUSG00000100062ENSMUST00000190901ENSMUSG00000100336ENSMUST00000187961ENSMUSG00000100362ENSMUST00000191608ENSMUSG00000100589ENSMUST00000189056ENSMUSG00000100777ENSMUST00000187352
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ZB_0001ENSG00000113532ENST00000231461ENST00000451528ENSG00000173930ENST00000310954ENSG00000221263ENST00000408336ENSG00000248261ENST00000506058ENSG00000251261ENST00000513483ENSG00000277506ENST00000577858CIL_0004ZB_0002ENSMUSG00000040693ENSMUST00000071985ENSMUSG00000040710ENSMUST00000043336ENSMUST00000186853ENSMUST00000187936ENSMUST00000189556ENSMUSG00000095955ENSMUST00000179775ENSMUSG00000097814ENSMUST00000181489ENSMUST00000188631ENSMUSG00000100062ENSMUST00000190901ENSMUSG00000100336ENSMUST00000187961ENSMUSG00000100362ENSMUST00000191608ENSMUSG00000100589ENSMUST00000189056ENSMUSG00000100777ENSMUST00000187352
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113532 ENST00000231461 3.318±0.00 2.350±0.00 0.504±0.00 1.131±0.47 2.168±0.20 0.931±0.28 0.667±0.14 0.601±0.22 0.900±0.63 3.415±0.75 0.170±0.15 0.585±0.26 2.335±0.70 0.383±0.22
ENST00000451528 N/A N/A 0.545±0.00 N/A 1.608±0.00 1.751±0.00 0.483±0.00 N/A 0.886±0.00 N/A 0.368±0.00 0.606±0.00 N/A N/A
ENST00000507360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173930 ENST00000310954 0.121±0.00 0.091±0.00 5.457±0.00 0.099±0.05 0.042±0.01 0.048±0.01 0.077±0.00 5.529±3.35 0.849±0.77 0.958±0.21 0.014±0.01 0.053±0.04 0.020±0.01 0.355±0.17
ENSG00000221263 ENST00000408336 N/A 1.415±0.00 N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248261 ENST00000506058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.224±0.03
ENSG00000251261 ENST00000513483 N/A N/A N/A N/A N/A 0.988±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000277506 ENST00000577858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040693 ENSMUST00000071985 0.283±0.19 N/A 0.020±0.00 0.291±0.16 0.071±0.03 0.120±0.07 0.120±0.02 1.112±0.48 0.352±0.31 9.878±1.17 0.004±0.00 0.210±0.12 1.329±1.75 0.015±0.01
ENSMUSG00000040710 ENSMUST00000043336 1.953±0.24 0.365±0.19 1.083±0.02 4.984±3.05 2.939±0.64 0.363±0.19 1.120±0.10 0.436±0.12 0.417±0.33 5.651±0.51 0.537±0.10 0.657±0.30 0.405±0.14 0.028±0.02
ENSMUST00000186853 N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 0.028±0.01 N/A N/A 0.145±0.06 N/A 0.025±0.00
ENSMUST00000187936 N/A 1.861±0.56 N/A N/A 6.852±1.10 0.467±0.13 N/A N/A N/A N/A N/A 0.680±0.34 N/A N/A
ENSMUST00000189556 N/A 0.139±0.05 N/A N/A N/A 0.048±0.02 N/A 0.084±0.00 0.052±0.03 N/A N/A 0.065±0.03 N/A 0.040±0.02
ENSMUSG00000095955 ENSMUST00000179775 N/A N/A 35.554±32.52 2.435±0.00 N/A N/A N/A N/A 4.138±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000097814 ENSMUST00000181489 0.136±0.11 0.055±0.02 0.174±0.10 0.227±0.02 0.095±0.03 0.816±0.45 0.040±0.02 0.383±0.14 0.381±0.42 1.393±0.35 0.008±0.00 0.404±0.28 0.531±0.57 0.018±0.01
ENSMUST00000188631 N/A N/A N/A N/A 0.134±0.00 N/A N/A N/A N/A N/A N/A 0.453±0.15 N/A 0.040±0.00
ENSMUSG00000100062 ENSMUST00000190901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.334±0.11
ENSMUSG00000100336 ENSMUST00000187961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A 3.204±1.02
ENSMUSG00000100362 ENSMUST00000191608 N/A N/A N/A 0.103±0.09 N/A 0.227±0.01 N/A N/A N/A N/A N/A N/A 0.111±0.10 N/A
ENSMUSG00000100589 ENSMUST00000189056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A 0.193±0.10
ENSMUSG00000100777 ENSMUST00000187352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.791±0.12

Loading