C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040710 St8sia4 10090 - 1:95587682-95667571 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043336 St8sia4-001 95587682-95667571 protein_coding
  ENSMUST00000186853 St8sia4-003 95663954-95667565 retained_intron
  ENSMUST00000187936 St8sia4-002 95658314-95667568 retained_intron
  ENSMUST00000189556 St8sia4-004 95618551-95667535 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043336ENSMUST00000186853ENSMUST00000187936ENSMUST00000189556
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043336 1.953±0.24 0.365±0.19 1.083±0.02 4.984±3.05 2.939±0.64 0.363±0.19 1.120±0.10 0.436±0.12 0.417±0.33 5.651±0.51 0.537±0.10 0.657±0.30 0.405±0.14 0.028±0.02
ENSMUST00000186853 N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 0.028±0.01 N/A N/A 0.145±0.06 N/A 0.025±0.00
ENSMUST00000187936 N/A 1.861±0.56 N/A N/A 6.852±1.10 0.467±0.13 N/A N/A N/A N/A N/A 0.680±0.34 N/A N/A
ENSMUST00000189556 N/A 0.139±0.05 N/A N/A N/A 0.048±0.02 N/A 0.084±0.00 0.052±0.03 N/A N/A 0.065±0.03 N/A 0.040±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z8 CIL_0004Z8_0002 CGP 1:95313623-95667571
CIL_0004ZB CIL_0004ZB_0002 CGP 1:95587682-96872171

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001574 IEA ganglioside biosynthetic process
GO:0003828 IDA alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity
GO:0006491 IEA N-glycan processing
GO:0009311 IEA oligosaccharide metabolic process
GO:0030173 IEA integral component of Golgi membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018699 st8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein_coding Danio_rerio
ENSG00000113532 ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 protein_coding Homo_sapiens

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