C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DENN/MADD domain containing 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394219 DENND1A-202 ENSG00000119522 9606 - 9:123379654-123676791 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverOvaryTestisENST00000394219
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Ovary Testis
ENST00000394219 3.856±0.00 2.112±0.00 1.862±0.00 3.244±0.00 0.733±0.00 1.932±1.18 2.006±0.00 1.978±1.20 3.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WP CIL_0006WP_0001 CGP 9:123356170-123930152
CIL_0006WO CIL_0006WO_0001 CGP 9:123379654-124033301

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102787 Dennd1a-001 protein_coding Mus_musculus 0 2782
ENSMUST00000140552 Dennd1a-002 nonsense_mediated_decay Mus_musculus 0 1578
ENSMUST00000150896 Dennd1a-003 nonsense_mediated_decay Mus_musculus 0 664
ENSMUST00000126889 Dennd1a-009 retained_intron Mus_musculus 0 448
ENSMUST00000136460 Dennd1a-010 protein_coding Mus_musculus 0 342
ENSMUST00000050372 Crb2-001 protein_coding Mus_musculus 8.40779e-45 187

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