C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124406 ATP8A1 9606 - 4:42408373-42657105 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264449 ATP8A1-003 42408377-42657093 protein_coding
  ENST00000381668 ATP8A1-001 42408373-42657105 protein_coding
  ENST00000504024 ATP8A1-005 42581692-42616078 nonsense_mediated_decay
  ENST00000504510 ATP8A1-006 42581682-42588617 retained_intron
  ENST00000506602 ATP8A1-008 42423617-42485513 nonsense_mediated_decay
  ENST00000506713 ATP8A1-007 42552555-42556235 retained_intron
  ENST00000510289 ATP8A1-002 42625141-42657093 protein_coding
  ENST00000511858 ATP8A1-009 42412975-42415147 retained_intron
  ENST00000514372 ATP8A1-004 42408373-42507154 nonsense_mediated_decay
  ENST00000515872 ATP8A1-010 42459358-42465075 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264449ENST00000381668ENST00000506602ENST00000514372
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264449 0.749±0.00 0.898±0.00 0.843±0.00 6.658±0.69 1.626±0.83 4.948±2.68 0.505±0.12 0.562±0.00 0.353±0.32 4.562±3.11 N/A 0.876±0.28 0.233±0.00 0.587±0.16
ENST00000381668 N/A N/A N/A 15.735±5.68 N/A N/A 1.216±0.00 N/A 0.032±0.00 N/A 4.704±1.49 N/A N/A N/A
ENST00000506602 N/A N/A 3.250±0.00 N/A N/A N/A N/A 1.456±0.00 N/A N/A N/A N/A N/A N/A
ENST00000514372 N/A 1.268±0.00 N/A 10.320±0.00 0.593±0.00 0.679±0.00 0.525±0.00 1.163±0.00 0.214±0.00 0.471±0.00 1.393±0.00 1.805±1.20 0.247±0.13 0.466±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OI CIL_0007OI_0001 UCNEbase 4:41748045-42425642
CIL_0007YP CIL_0007YP_0001 VISTA 4:41848074-42449047
CIL_0002Z0 CIL_0002Z0_0001 CGP 4:42397839-42657105

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0007612 IEA learning
GO:0008152 IEA metabolic process
GO:0015914 IEA phospholipid transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019829 NAS cation-transporting ATPase activity
GO:0030335 IEA positive regulation of cell migration
GO:0031410 IEA cytoplasmic vesicle
GO:0034220 TAS ion transmembrane transport
GO:0045332 IEA:NAS phospholipid translocation
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0061092 IEA positive regulation of phospholipid translocation
GO:0070062 IDA extracellular vesicular exosome
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063001 atp8a1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 protein_coding Danio_rerio
ENSMUSG00000037685 Atp8a1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 protein_coding Mus_musculus

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