C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PHD finger protein 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480008 PHF10-003 ENSG00000130024 9606 - 6:169707028-169724005 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000480008
Transcript ID Ovary
ENST00000480008 4.954±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W2 CIL_0004W2_0001 CGP 6:169457212-169704856
CIL_0004W9 CIL_0004W9_0001 CGP 6:169702190-169725566
CIL_0004WA CIL_0004WA_0001 CGP 6:169703905-169751559

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168938 Phf10-002 nonsense_mediated_decay Mus_musculus 0 1482
ENSMUST00000024657 Phf10-001 protein_coding Mus_musculus 0 970
ENSMUST00000167805 Phf10-003 retained_intron Mus_musculus 0 424
ENSMUST00000174163 1600012H06Rik-004 processed_transcript Mus_musculus 3.99931e-42 178
ENSDART00000121598 phf10-001 protein_coding Danio_rerio 0.0000001 64

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