C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: huntingtin interacting protein 1 related
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130787 HIP1R 9606 + 12:122834453-122862960 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253083 HIP1R-001 122835426-122862960 protein_coding
  ENST00000452196 HIP1R-003 122835481-122857384 retained_intron
  ENST00000535012 HIP1R-010 122860165-122862084 protein_coding
  ENST00000535831 HIP1R-004 122834453-122858017 retained_intron
  ENST00000536617 HIP1R-002 122859422-122862383 retained_intron
  ENST00000536772 HIP1R-007 122850806-122855359 retained_intron
  ENST00000536847 HIP1R-008 122853483-122856101 retained_intron
  ENST00000537322 HIP1R-011 122861716-122862486 processed_transcript
  ENST00000538236 HIP1R-009 122860038-122861647 retained_intron
  ENST00000541712 HIP1R-006 122858825-122860329 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000253083ENST00000452196ENST00000535012ENST00000535831ENST00000536617
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000253083 13.914±0.00 15.417±0.00 2.919±0.00 14.029±11.25 5.068±2.52 3.645±1.58 2.437±2.12 13.966±13.31 4.401±3.61 3.414±1.79 0.978±0.00 10.562±6.92 7.225±1.94 6.043±1.54
ENST00000452196 N/A N/A N/A N/A N/A N/A N/A 1.200±0.00 N/A N/A 0.558±0.00 N/A N/A N/A
ENST00000535012 N/A N/A N/A N/A N/A N/A N/A 1.200±0.00 N/A N/A N/A N/A N/A N/A
ENST00000535831 N/A N/A N/A 5.696±0.00 N/A N/A 0.283±0.00 N/A N/A N/A N/A N/A N/A 1.830±0.00
ENST00000536617 N/A N/A N/A 1.973±0.00 2.619±0.00 N/A 0.287±0.00 1.477±0.00 N/A N/A N/A 7.118±5.24 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0001 VISTA 12:122762377-123367178
CIL_0001EI CIL_0001EI_0001 CGP 12:122774327-122862960
CIL_0002PB CIL_0002PB_0001 CGP 12:122834453-122896444

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005543 IEA phospholipid binding
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005905 IEA coated pit
GO:0006898 IMP receptor-mediated endocytosis
GO:0016020 IEA membrane
GO:0030136 IDA clathrin-coated vesicle
GO:0035091 IDA phosphatidylinositol binding
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059484 hip1rb huntingtin interacting protein 1 related b protein_coding Danio_rerio
ENSDARG00000060627 HIP1R (2 of 2) huntingtin interacting protein 1 related protein_coding Danio_rerio
ENSMUSG00000000915 Hip1r huntingtin interacting protein 1 related protein_coding Mus_musculus

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