C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001EI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130783-ENSG00000130787 CGP 9606 12:122774327-122862960
GeneTranscriptPositionBiotype
ENSG00000130783 (CCDC62)
coiled-coil domain containing 62 		ENST00000253079 (CCDC62-001) 122774327-122827528 protein_coding
ENST00000341952 (CCDC62-002) 122774528-122827384 nonsense_mediated_decay
ENST00000392440 (CCDC62-201) 122788785-122827211 protein_coding
ENST00000392441 (CCDC62-005) 122774526-122827211 protein_coding
ENST00000537566 (CCDC62-003) 122776558-122827378 protein_coding
ENST00000539171 (CCDC62-004) 122774532-122788811 protein_coding
ENSG00000130787 (HIP1R)
huntingtin interacting protein 1 related 		ENST00000253083 (HIP1R-001) 122835426-122862960 protein_coding
ENST00000452196 (HIP1R-003) 122835481-122857384 retained_intron
ENST00000535012 (HIP1R-010) 122860165-122862084 protein_coding
ENST00000535831 (HIP1R-004) 122834453-122858017 retained_intron
ENST00000536617 (HIP1R-002) 122859422-122862383 retained_intron
ENST00000536772 (HIP1R-007) 122850806-122855359 retained_intron
ENST00000536847 (HIP1R-008) 122853483-122856101 retained_intron
ENST00000537322 (HIP1R-011) 122861716-122862486 processed_transcript
ENST00000538236 (HIP1R-009) 122860038-122861647 retained_intron
ENST00000541712 (HIP1R-006) 122858825-122860329 retained_intron
CIL_0001EI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061882-ENSMUSG00000000915 CGP 10090 5:123927418-124003211
GeneTranscriptPositionBiotype
ENSMUSG00000000915 (Hip1r)
huntingtin interacting protein 1 related 		ENSMUST00000000939 (Hip1r-001) 123973628-124003211 protein_coding
ENSMUST00000166258 (Hip1r-003) 123994805-123997399 nonsense_mediated_decay
ENSMUST00000166684 (Hip1r-006) 124000599-124001674 retained_intron
ENSMUST00000167325 (Hip1r-005) 124000383-124001688 retained_intron
ENSMUST00000167879 (Hip1r-002) 123980254-123989984 protein_coding
ENSMUST00000171407 (Hip1r-004) 123999410-124001007 retained_intron
ENSMUSG00000023106 (Denr)
density-regulated protein 		ENSMUST00000023869 (Denr-001) 123907175-123928832 protein_coding
ENSMUST00000166233 (Denr-002) 123907489-123927133 protein_coding
ENSMUST00000168899 (Denr-003) 123907269-123908508 processed_transcript
ENSMUST00000171639 (Denr-004) 123907282-123908488 retained_intron
ENSMUSG00000061882 (Ccdc62)
coiled-coil domain containing 62 		ENSMUST00000094320 (Ccdc62-001) 123930689-123968909 protein_coding
ENSMUST00000165148 (Ccdc62-201) 123930689-123969895 protein_coding
ENSMUST00000166129 (Ccdc62-003) 123927418-123938388 retained_intron
ENSMUST00000166983 (Ccdc62-002) 123930689-123936645 retained_intron
ENSMUST00000169898 (Ccdc62-004) 123946386-123954515 nonsense_mediated_decay
ENSMUST00000171881 (Ccdc62-005) 123954502-123957610 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001EI_0001ENSG00000130783ENST00000253079ENST00000341952ENST00000392440ENST00000392441ENST00000537566ENST00000539171ENSG00000130787ENST00000253083ENST00000452196ENST00000535012ENST00000535831ENST00000536617ENST00000536772ENST00000536847ENST00000537322ENST00000538236ENST00000541712CIL_0001EI_0002ENSMUSG00000000915ENSMUST00000000939ENSMUST00000166258ENSMUST00000166684ENSMUST00000167325ENSMUST00000167879ENSMUST00000171407ENSMUSG00000023106ENSMUST00000023869ENSMUST00000166233ENSMUST00000168899ENSMUST00000171639ENSMUSG00000061882ENSMUST00000094320ENSMUST00000165148ENSMUST00000166129ENSMUST00000166983ENSMUST00000169898ENSMUST00000171881
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001EI_0001ENSG00000130783ENST00000253079ENST00000341952ENST00000392440ENST00000392441ENST00000537566ENST00000539171ENSG00000130787ENST00000253083ENST00000452196ENST00000535012ENST00000535831ENST00000536617CIL_0001EI_0002ENSMUSG00000000915ENSMUST00000000939ENSMUSG00000023106ENSMUST00000023869ENSMUST00000166233ENSMUST00000168899ENSMUSG00000061882ENSMUST00000094320ENSMUST00000166983
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130783 ENST00000253079 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 0.042±0.00 N/A 0.020±0.00 21.299±12.82
ENST00000341952 N/A N/A 0.042±0.00 0.490±0.00 N/A N/A 0.138±0.00 N/A N/A 0.027±0.00 0.122±0.06 0.053±0.02 N/A 31.372±17.37
ENST00000392440 0.053±0.00 N/A N/A 0.135±0.00 N/A 0.026±0.00 0.054±0.00 N/A 0.030±0.00 N/A N/A 0.044±0.00 0.018±0.00 5.768±0.00
ENST00000392441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 12.567±0.00
ENST00000537566 N/A 0.077±0.00 0.073±0.00 N/A 0.063±0.00 0.032±0.00 N/A N/A 0.007±0.00 0.049±0.00 N/A N/A 0.028±0.00 N/A
ENST00000539171 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.336±0.00 1.051±0.00 N/A 0.167±0.00 N/A
ENSG00000130787 ENST00000253083 13.914±0.00 15.417±0.00 2.919±0.00 14.029±11.25 5.068±2.52 3.645±1.58 2.437±2.12 13.966±13.31 4.401±3.61 3.414±1.79 0.978±0.00 10.562±6.92 7.225±1.94 6.043±1.54
ENST00000452196 N/A N/A N/A N/A N/A N/A N/A 1.200±0.00 N/A N/A 0.558±0.00 N/A N/A N/A
ENST00000535012 N/A N/A N/A N/A N/A N/A N/A 1.200±0.00 N/A N/A N/A N/A N/A N/A
ENST00000535831 N/A N/A N/A 5.696±0.00 N/A N/A 0.283±0.00 N/A N/A N/A N/A N/A N/A 1.830±0.00
ENST00000536617 N/A N/A N/A 1.973±0.00 2.619±0.00 N/A 0.287±0.00 1.477±0.00 N/A N/A N/A 7.118±5.24 N/A N/A
ENST00000536772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000915 ENSMUST00000000939 4.697±0.40 4.067±0.91 28.272±1.47 14.866±8.31 12.541±6.30 15.444±0.96 3.384±0.42 10.764±0.39 7.612±2.32 16.552±0.62 2.728±0.68 12.724±2.24 17.451±4.51 6.998±0.86
ENSMUST00000166258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000023106 ENSMUST00000023869 4.657±1.61 2.726±0.89 10.880±0.85 12.352±0.93 3.336±0.66 2.796±0.72 3.046±0.52 4.356±1.73 8.312±4.68 4.301±0.47 3.953±0.86 3.721±2.75 10.004±4.81 15.437±0.34
ENSMUST00000166233 N/A N/A 14.898±1.02 117.807±0.00 N/A N/A N/A N/A 16.419±7.37 N/A 16.680±4.24 52.690±44.95 72.118±88.22 205.944±0.00
ENSMUST00000168899 N/A 7.208±1.94 N/A N/A 6.747±1.66 6.898±1.69 18.858±4.18 16.369±5.12 17.152±3.91 11.717±0.57 N/A 6.546±3.14 28.293±0.00 N/A
ENSMUST00000171639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000061882 ENSMUST00000094320 1.435±0.11 0.955±0.21 3.464±0.71 2.209±0.01 1.532±0.33 0.701±0.08 0.494±0.00 1.460±0.27 0.996±0.28 1.524±0.32 N/A 1.692±0.72 N/A 36.193±10.86
ENSMUST00000165148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166983 N/A 2.191±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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