C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: huntingtin interacting protein 1 related
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000536617 HIP1R-002 ENSG00000130787 9606 + 12:122859422-122862383 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyOvaryENST00000536617
Transcript ID Brain Breast Heart Kidney Ovary
ENST00000536617 1.973±0.00 2.619±0.00 0.287±0.00 1.477±0.00 7.118±5.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0001 VISTA 12:122762377-123367178
CIL_0001EI CIL_0001EI_0001 CGP 12:122774327-122862960
CIL_0002PB CIL_0002PB_0001 CGP 12:122834453-122896444

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000939 Hip1r-001 protein_coding Mus_musculus 0 837
ENSMUST00000167325 Hip1r-005 retained_intron Mus_musculus 0 399
ENSMUST00000171407 Hip1r-004 retained_intron Mus_musculus 0 259
ENSMUST00000166684 Hip1r-006 retained_intron Mus_musculus 0.00000005 64

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