C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 236
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000320610 ZNF236-002 ENSG00000130856 9606 + 18:76822607-76969918 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320610
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320610 0.575±0.00 0.453±0.00 0.409±0.23 0.525±0.08 0.439±0.00 0.272±0.04 0.866±0.00 1.252±0.00 0.357±0.00 0.402±0.05 0.864±0.22 0.498±0.34 3.284±1.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088F CIL_00088F_0001 VISTA 18:76223999-76826442
CIL_000017 CIL_000017_0002 CGP 18:76822607-77133683

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182122 Zfp236-001 protein_coding Mus_musculus 0 5216
ENSMUST00000171071 Zfp236-002 protein_coding Mus_musculus 0 4207
ENSMUST00000183048 Zfp236-003 nonsense_mediated_decay Mus_musculus 0 3975
ENSMUST00000183324 Zfp236-004 nonsense_mediated_decay Mus_musculus 0 915
ENSMUST00000182866 Zfp236-005 protein_coding Mus_musculus 2.8026e-45 189
ENSDART00000149720 znf236-001 protein_coding Danio_rerio 3e-30 139
ENSDART00000081436 BX539307.1-201 protein_coding Danio_rerio 0.0000000004 73

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