C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 236
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000253159 ZNF236-001 ENSG00000130856 9606 + 18:76824160-76970727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLungMuscleOvaryTestisENST00000253159
Transcript ID Brain Colon Lung Muscle Ovary Testis
ENST00000253159 0.501±0.34 0.567±0.00 0.821±0.00 0.302±0.00 0.409±0.00 2.094±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088F CIL_00088F_0001 VISTA 18:76223999-76826442
CIL_000017 CIL_000017_0002 CGP 18:76822607-77133683

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0071333 IEP cellular response to glucose stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182122 Zfp236-001 protein_coding Mus_musculus 0 5142
ENSMUST00000171071 Zfp236-002 protein_coding Mus_musculus 0 4207
ENSMUST00000183048 Zfp236-003 nonsense_mediated_decay Mus_musculus 0 3975
ENSMUST00000183324 Zfp236-004 nonsense_mediated_decay Mus_musculus 0 915
ENSMUST00000182866 Zfp236-005 protein_coding Mus_musculus 1.4013e-45 191
ENSDART00000149720 znf236-001 protein_coding Danio_rerio 4e-30 139
ENSDART00000081436 BX539307.1-201 protein_coding Danio_rerio 0.0000000004 73

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