C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132122 SPATA6 9606 - 1:48295372-48472208 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371841 SPATA6-005 48305799-48400850 protein_coding
  ENST00000371843 SPATA6-002 48297837-48472010 protein_coding
  ENST00000371847 SPATA6-001 48295372-48472173 protein_coding
  ENST00000396199 SPATA6-201 48295374-48472208 protein_coding
  ENST00000463938 SPATA6-003 48399052-48472016 processed_transcript
  ENST00000465990 SPATA6-009 48411464-48451586 processed_transcript
  ENST00000471975 SPATA6-008 48411487-48472155 processed_transcript
  ENST00000487543 SPATA6-007 48399583-48472085 nonsense_mediated_decay
  ENST00000487629 SPATA6-006 48355445-48359722 processed_transcript
  ENST00000490850 SPATA6-004 48305805-48402744 processed_transcript
  ENST00000603831 SPATA6-010 48298644-48400911 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371841ENST00000371843ENST00000371847ENST00000396199ENST00000463938ENST00000487629ENST00000490850ENST00000603831
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371841 2.189±0.00 N/A N/A N/A 2.201±0.00 N/A N/A N/A N/A 2.866±0.00 0.545±0.07 0.995±0.00 1.150±0.00 30.770±0.00
ENST00000371843 0.742±0.00 0.428±0.00 0.798±0.00 0.838±0.00 N/A N/A 0.338±0.00 N/A 1.934±0.00 N/A N/A 0.752±0.00 0.336±0.08 13.039±7.36
ENST00000371847 N/A 0.321±0.00 0.774±0.00 0.659±0.00 0.657±0.00 0.195±0.00 0.348±0.08 1.064±0.00 0.268±0.00 0.573±0.00 N/A 1.497±0.80 0.778±0.20 4.128±1.44
ENST00000396199 N/A N/A N/A 0.615±0.00 0.212±0.00 0.724±0.00 N/A 0.450±0.28 N/A 1.095±0.16 N/A N/A N/A N/A
ENST00000463938 N/A N/A N/A 1.801±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487629 N/A N/A N/A N/A N/A N/A N/A 1.256±0.00 N/A N/A N/A N/A N/A N/A
ENST00000490850 N/A N/A N/A 1.883±0.00 N/A 1.759±0.00 1.123±0.00 N/A 3.713±0.00 4.332±0.00 0.131±0.00 N/A N/A 75.549±0.00
ENST00000603831 N/A 0.959±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.405±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000633 CIL_000633_0002 CGP 1:48295372-50023913

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021115 spata6 spermatogenesis associated 6 protein_coding Danio_rerio
ENSMUSG00000034401 Spata6 spermatogenesis associated 6 protein_coding Mus_musculus

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