C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034401 Spata6 10090 + 4:111719984-111829184 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038868 Spata6-001 111719984-111829142 protein_coding
  ENSMUST00000070513 Spata6-006 111720009-111768757 protein_coding
  ENSMUST00000084354 Spata6-004 111720205-111829184 protein_coding
  ENSMUST00000122820 Spata6-002 111720010-111807054 processed_transcript
  ENSMUST00000123718 Spata6-009 111720129-111779061 processed_transcript
  ENSMUST00000125999 Spata6-010 111777597-111780271 processed_transcript
  ENSMUST00000132802 Spata6-012 111822263-111828202 processed_transcript
  ENSMUST00000134000 Spata6-013 111720103-111779596 processed_transcript
  ENSMUST00000137072 Spata6-011 111805861-111822802 processed_transcript
  ENSMUST00000140366 Spata6-007 111720059-111768817 processed_transcript
  ENSMUST00000143879 Spata6-005 111777558-111829134 processed_transcript
  ENSMUST00000149834 Spata6-014 111774799-111828194 processed_transcript
  ENSMUST00000153746 Spata6-003 111720038-111778291 protein_coding
  ENSMUST00000156179 Spata6-008 111720063-111779011 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038868ENSMUST00000070513ENSMUST00000084354ENSMUST00000122820ENSMUST00000132802ENSMUST00000137072ENSMUST00000140366ENSMUST00000143879ENSMUST00000149834ENSMUST00000153746
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038868 4.498±0.58 2.220±0.20 9.697±0.80 2.568±0.19 3.397±0.57 1.589±0.56 1.479±0.29 4.034±0.47 0.852±0.36 5.699±0.38 0.941±0.28 3.091±1.39 2.472±1.43 75.095±13.47
ENSMUST00000070513 8.757±0.48 15.426±4.84 N/A N/A 8.648±2.04 5.404±2.27 N/A 6.186±1.69 0.466±0.20 8.753±2.88 N/A 11.488±4.37 N/A N/A
ENSMUST00000084354 N/A N/A N/A 0.247±0.00 N/A N/A N/A N/A 0.263±0.07 N/A N/A 4.464±0.95 1.577±0.88 N/A
ENSMUST00000122820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.693±0.00 N/A N/A
ENSMUST00000132802 N/A N/A N/A N/A N/A N/A N/A N/A 0.834±0.00 N/A N/A N/A N/A N/A
ENSMUST00000137072 N/A N/A N/A 11.340±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 63.162±0.00 N/A
ENSMUST00000140366 N/A N/A N/A N/A N/A N/A N/A N/A 0.259±0.05 N/A N/A N/A N/A N/A
ENSMUST00000143879 2.699±0.00 N/A N/A N/A 1.872±0.00 1.072±0.00 N/A N/A 0.261±0.25 N/A 0.425±0.04 3.982±1.63 2.219±1.18 67.635±19.37
ENSMUST00000149834 N/A N/A N/A 1.719±0.00 2.838±0.00 N/A N/A N/A N/A N/A N/A 10.682±5.74 14.861±3.00 888.836±0.00
ENSMUST00000153746 N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UZ CIL_0008UZ_0002 VISTA 4:111252851-111853446

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0008150 ND biological_process
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021115 spata6 spermatogenesis associated 6 protein_coding Danio_rerio
ENSG00000132122 SPATA6 spermatogenesis associated 6 protein_coding Homo_sapiens

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