C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000633_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021115-ENSDARG00000068050 CGP 7955 8:15804375-16510926
GeneTranscriptPositionBiotype
ENSDARG00000021115 (spata6)
spermatogenesis associated 6 		ENSDART00000134794 (spata6-001) 15804375-15822479 protein_coding
ENSDART00000137923 (spata6-002) 15809318-15822474 nonsense_mediated_decay
ENSDART00000140867 (spata6-003) 15804579-15809148 protein_coding
ENSDARG00000075624 (bend5)
BEN domain containing 5 		ENSDART00000111314 (bend5-201) 16020966-16037550 protein_coding
ENSDART00000133114 (bend5-001) 16019736-16037858 protein_coding
ENSDARG00000096772 (si:ch211-221e5.1)
si:ch211-221e5.1 		ENSDART00000153432 (si:ch211-221e5.1-001) 15993576-15996758 lincRNA

Danio rerio Ensembl (Zv9)

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CIL_000633_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132122-ENSG00000186094 CGP 9606 1:48295372-50023913
GeneTranscriptPositionBiotype
ENSG00000132122 (SPATA6)
spermatogenesis associated 6 		ENST00000371841 (SPATA6-005) 48305799-48400850 protein_coding
ENST00000371843 (SPATA6-002) 48297837-48472010 protein_coding
ENST00000371847 (SPATA6-001) 48295372-48472173 protein_coding
ENST00000396199 (SPATA6-201) 48295374-48472208 protein_coding
ENST00000463938 (SPATA6-003) 48399052-48472016 processed_transcript
ENST00000465990 (SPATA6-009) 48411464-48451586 processed_transcript
ENST00000471975 (SPATA6-008) 48411487-48472155 processed_transcript
ENST00000487543 (SPATA6-007) 48399583-48472085 nonsense_mediated_decay
ENST00000487629 (SPATA6-006) 48355445-48359722 processed_transcript
ENST00000490850 (SPATA6-004) 48305805-48402744 processed_transcript
ENST00000603831 (SPATA6-010) 48298644-48400911 nonsense_mediated_decay
ENSG00000162373 (BEND5)
BEN domain containing 5 		ENST00000371833 (BEND5-001) 48727523-48776918 protein_coding
ENST00000463562 (BEND5-002) 48727870-48776932 retained_intron
ENST00000476079 (BEND5-004) 48727867-48758933 processed_transcript
ENST00000476096 (BEND5-005) 48727873-48759255 processed_transcript
ENST00000480399 (BEND5-003) 48759207-48776969 processed_transcript
ENST00000489956 (BEND5-006) 48761048-48776735 retained_intron
ENSG00000186094 (AGBL4)
ATP/GTP binding protein-like 4 		ENST00000334103 (AGBL4-201) 48534173-48663244 protein_coding
ENST00000371836 (AGBL4-003) 48817507-50023900 protein_coding
ENST00000371838 (AGBL4-004) 48634208-50023913 protein_coding
ENST00000371839 (AGBL4-001) 48532855-50023913 protein_coding
ENST00000416121 (AGBL4-002) 48583870-49045714 protein_coding
ENST00000497451 (AGBL4-005) 49527228-49851518 processed_transcript
ENSG00000206700 (RNU6-723P)
RNA, U6 small nuclear 723, pseudogene 		ENST00000383973 (RNU6-723P-201) 48344209-48344315 snRNA
ENSG00000215887 (ZNF859P)
zinc finger protein 859, pseudogene 		ENST00000502859 (ZNF859P-001) 49841821-49846400 unprocessed_pseudogene
ENSG00000224986 (PPP1R8P1)
protein phosphatase 1, regulatory subunit 8 pseudogene 1 		ENST00000452549 (PPP1R8P1-001) 48325080-48326123 processed_pseudogene
ENSG00000225623 (AGBL4-IT1)
AGBL4 intronic transcript 1 (non-protein coding) 		ENST00000457061 (AGBL4-IT1-001) 49374201-49472085 sense_intronic
ENSG00000229846 (RP11-141A19.1)
 ENST00000456002 (RP11-141A19.1-001) 49048316-49187585 antisense
ENSG00000230114 (RP11-141A19.2)
 ENST00000420071 (RP11-141A19.2-001) 49257411-49269285 antisense
ENSG00000232514 (RP11-329A14.2)
 ENST00000416622 (RP11-329A14.2-001) 48497263-48497736 processed_pseudogene
ENSG00000233595 (MTND2P29)
MT-ND2 pseudogene 29 		ENST00000438595 (MTND2P29-001) 50017092-50017503 processed_pseudogene
ENSG00000235105 (RP11-329A14.1)
 ENST00000412769 (RP11-329A14.1-001) 48435967-48437223 processed_pseudogene
ENSG00000237478 (RP5-926E3.1)
 ENST00000428836 (RP5-926E3.1-001) 49691262-49691523 processed_pseudogene
ENSG00000279324 (RP11-93G23.2)
 ENST00000622945 (RP11-93G23.2-001) 49994318-49996218 TEC

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000633_0001ENSDARG00000021115ENSDART00000134794ENSDART00000137923ENSDART00000140867ENSDARG00000075624ENSDART00000111314ENSDART00000133114ENSDARG00000096772ENSDART00000153432CIL_000633_0002ENSG00000132122ENST00000371841ENST00000371843ENST00000371847ENST00000396199ENST00000463938ENST00000465990ENST00000471975ENST00000487543ENST00000487629ENST00000490850ENST00000603831ENSG00000162373ENST00000371833ENST00000463562ENST00000476079ENST00000476096ENST00000480399ENST00000489956ENSG00000186094ENST00000334103ENST00000371836ENST00000371838ENST00000371839ENST00000416121ENST00000497451ENSG00000206700ENST00000383973ENSG00000215887ENST00000502859ENSG00000224986ENST00000452549ENSG00000225623ENST00000457061ENSG00000229846ENST00000456002ENSG00000230114ENST00000420071ENSG00000232514ENST00000416622ENSG00000233595ENST00000438595ENSG00000235105ENST00000412769ENSG00000237478ENST00000428836ENSG00000279324ENST00000622945
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000633_0001ENSDARG00000021115ENSDART00000134794ENSDART00000140867ENSDARG00000075624ENSDART00000111314ENSDART00000133114ENSDARG00000096772ENSDART00000153432CIL_000633_0002ENSG00000132122ENST00000371841ENST00000371843ENST00000371847ENST00000396199ENST00000463938ENST00000487629ENST00000490850ENST00000603831ENSG00000162373ENST00000371833ENST00000463562ENST00000476079ENST00000476096ENST00000480399ENST00000489956ENSG00000186094ENST00000334103ENST00000371836ENST00000371838ENST00000371839ENST00000416121ENST00000497451ENSG00000206700ENST00000383973ENSG00000215887ENST00000502859ENSG00000224986ENST00000452549ENSG00000225623ENST00000457061ENSG00000229846ENST00000456002ENSG00000230114ENST00000420071ENSG00000232514ENST00000416622ENSG00000233595ENST00000438595ENSG00000235105ENST00000412769ENSG00000237478ENST00000428836ENSG00000279324ENST00000622945
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021115 ENSDART00000134794 N/A N/A N/A 0.492±0.26 N/A N/A 1.948±0.44 1.652±0.25 0.052±0.00 N/A N/A N/A N/A N/A
ENSDART00000137923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140867 N/A N/A N/A N/A N/A N/A 0.820±0.01 1.201±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000075624 ENSDART00000111314 N/A N/A N/A N/A N/A N/A 0.271±0.02 N/A N/A N/A 0.095±0.00 N/A N/A N/A
ENSDART00000133114 N/A N/A N/A 2.114±0.20 N/A N/A 0.149±0.03 0.563±0.25 0.154±0.00 N/A 0.185±0.00 N/A N/A N/A
ENSDARG00000096772 ENSDART00000153432 N/A N/A N/A 0.568±0.23 N/A N/A 0.271±0.08 0.408±0.30 N/A N/A 0.054±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132122 ENST00000371841 2.189±0.00 N/A N/A N/A 2.201±0.00 N/A N/A N/A N/A 2.866±0.00 0.545±0.07 0.995±0.00 1.150±0.00 30.770±0.00
ENST00000371843 0.742±0.00 0.428±0.00 0.798±0.00 0.838±0.00 N/A N/A 0.338±0.00 N/A 1.934±0.00 N/A N/A 0.752±0.00 0.336±0.08 13.039±7.36
ENST00000371847 N/A 0.321±0.00 0.774±0.00 0.659±0.00 0.657±0.00 0.195±0.00 0.348±0.08 1.064±0.00 0.268±0.00 0.573±0.00 N/A 1.497±0.80 0.778±0.20 4.128±1.44
ENST00000396199 N/A N/A N/A 0.615±0.00 0.212±0.00 0.724±0.00 N/A 0.450±0.28 N/A 1.095±0.16 N/A N/A N/A N/A
ENST00000463938 N/A N/A N/A 1.801±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487629 N/A N/A N/A N/A N/A N/A N/A 1.256±0.00 N/A N/A N/A N/A N/A N/A
ENST00000490850 N/A N/A N/A 1.883±0.00 N/A 1.759±0.00 1.123±0.00 N/A 3.713±0.00 4.332±0.00 0.131±0.00 N/A N/A 75.549±0.00
ENST00000603831 N/A 0.959±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.405±0.00
ENSG00000162373 ENST00000371833 0.384±0.00 0.983±0.00 0.357±0.00 1.767±0.16 0.169±0.00 1.117±0.00 0.168±0.08 0.723±0.00 0.195±0.00 0.260±0.00 0.175±0.00 1.660±1.07 0.290±0.15 1.389±0.44
ENST00000463562 0.612±0.00 2.399±0.00 N/A 5.301±0.00 0.427±0.36 2.589±0.00 0.250±0.17 3.411±0.00 0.184±0.00 0.434±0.28 N/A 2.682±2.51 0.493±0.36 1.593±0.80
ENST00000476079 N/A 1.757±0.00 1.086±0.00 3.999±0.00 0.639±0.11 N/A N/A N/A 0.421±0.00 1.066±0.10 1.782±1.16 1.961±0.64 N/A 1.614±0.00
ENST00000476096 N/A 2.455±0.00 N/A N/A 0.422±0.00 0.176±0.00 N/A N/A N/A 1.367±0.00 0.650±0.00 N/A N/A N/A
ENST00000480399 0.826±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489956 N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000186094 ENST00000334103 N/A N/A N/A N/A N/A N/A N/A 1.012±0.00 N/A N/A N/A 0.031±0.00 0.414±0.00 N/A
ENST00000371836 N/A N/A N/A N/A N/A N/A 0.142±0.00 N/A N/A 0.193±0.01 N/A N/A N/A N/A
ENST00000371838 N/A N/A 0.588±0.00 1.073±0.00 N/A 0.098±0.07 N/A N/A 0.030±0.00 N/A N/A 0.182±0.14 N/A 0.195±0.00
ENST00000371839 0.037±0.00 N/A 0.436±0.00 1.908±0.90 0.195±0.00 N/A 0.046±0.00 0.333±0.00 0.046±0.00 0.216±0.00 N/A 0.059±0.06 0.223±0.06 0.433±0.06
ENST00000416121 0.025±0.00 0.148±0.00 0.117±0.00 N/A 0.058±0.00 N/A N/A 0.097±0.00 0.077±0.05 N/A 0.185±0.18 N/A N/A 0.194±0.00
ENST00000497451 N/A N/A N/A N/A 0.754±0.00 N/A 0.269±0.00 N/A N/A N/A N/A 0.254±0.00 N/A 0.332±0.00
ENSG00000206700 ENST00000383973 N/A N/A N/A 0.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000215887 ENST00000502859 N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A 0.041±0.00 N/A 0.022±0.00
ENSG00000224986 ENST00000452549 N/A 0.042±0.00 0.375±0.00 0.405±0.00 0.134±0.11 0.918±0.00 0.100±0.06 N/A 0.746±0.73 0.397±0.30 0.029±0.02 0.228±0.33 0.103±0.00 0.065±0.04
ENSG00000225623 ENST00000457061 N/A N/A N/A 0.292±0.20 N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A N/A 0.556±0.54
ENSG00000229846 ENST00000456002 N/A N/A 0.279±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 0.025±0.00 0.215±0.02
ENSG00000230114 ENST00000420071 N/A N/A N/A 0.447±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00
ENSG00000232514 ENST00000416622 N/A N/A N/A 0.353±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233595 ENST00000438595 N/A 0.080±0.00 N/A 0.655±0.46 0.100±0.00 0.518±0.00 0.076±0.00 0.367±0.00 0.043±0.00 1.049±0.00 0.023±0.00 N/A N/A 0.148±0.00
ENSG00000235105 ENST00000412769 N/A N/A N/A N/A N/A N/A N/A N/A 0.360±0.00 N/A 0.298±0.00 N/A N/A N/A
ENSG00000237478 ENST00000428836 N/A N/A 3.847±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00
ENSG00000279324 ENST00000622945 0.079±0.00 0.104±0.00 0.169±0.00 0.096±0.02 0.204±0.00 0.091±0.00 0.024±0.00 N/A 0.079±0.04 0.074±0.03 N/A 0.034±0.00 N/A 0.020±0.00

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