C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396199 SPATA6-201 ENSG00000132122 9606 - 1:48295374-48472208 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLungENST00000396199
Transcript ID Brain Breast Colon Kidney Lung
ENST00000396199 0.615±0.00 0.212±0.00 0.724±0.00 0.450±0.28 1.095±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000633 CIL_000633_0002 CGP 1:48295372-50023913

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038868 Spata6-001 protein_coding Mus_musculus 0 1607
ENSMUST00000143879 Spata6-005 processed_transcript Mus_musculus 0 1299
ENSMUST00000122820 Spata6-002 processed_transcript Mus_musculus 0 1147
ENSMUST00000084354 Spata6-004 protein_coding Mus_musculus 0 1086
ENSMUST00000134000 Spata6-013 processed_transcript Mus_musculus 0 1048
ENSMUST00000149834 Spata6-014 processed_transcript Mus_musculus 0 819
ENSMUST00000123718 Spata6-009 processed_transcript Mus_musculus 0 737
ENSMUST00000070513 Spata6-006 protein_coding Mus_musculus 0 654
ENSMUST00000153746 Spata6-003 protein_coding Mus_musculus 0 547
ENSMUST00000140366 Spata6-007 processed_transcript Mus_musculus 0 531
ENSMUST00000125999 Spata6-010 processed_transcript Mus_musculus 0 390
ENSMUST00000156179 Spata6-008 processed_transcript Mus_musculus 0 327
ENSMUST00000137072 Spata6-011 processed_transcript Mus_musculus 0 220
ENSMUST00000132802 Spata6-012 processed_transcript Mus_musculus 2e-31 143

Loading