C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371847 SPATA6-001 ENSG00000132122 9606 - 1:48295372-48472173 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000371847
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000371847 0.321±0.00 0.774±0.00 0.659±0.00 0.657±0.00 0.195±0.00 0.348±0.08 1.064±0.00 0.268±0.00 0.573±0.00 1.497±0.80 0.778±0.20 4.128±1.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000633 CIL_000633_0002 CGP 1:48295372-50023913

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038868 Spata6-001 protein_coding Mus_musculus 0 2220
ENSMUST00000122820 Spata6-002 processed_transcript Mus_musculus 0 1760
ENSMUST00000084354 Spata6-004 protein_coding Mus_musculus 0 1530
ENSMUST00000143879 Spata6-005 processed_transcript Mus_musculus 0 1299
ENSMUST00000153746 Spata6-003 protein_coding Mus_musculus 0 926
ENSMUST00000149834 Spata6-014 processed_transcript Mus_musculus 0 819
ENSMUST00000134000 Spata6-013 processed_transcript Mus_musculus 0 773
ENSMUST00000123718 Spata6-009 processed_transcript Mus_musculus 0 710
ENSMUST00000140366 Spata6-007 processed_transcript Mus_musculus 0 693
ENSMUST00000070513 Spata6-006 protein_coding Mus_musculus 0 544
ENSMUST00000156179 Spata6-008 processed_transcript Mus_musculus 0 401
ENSMUST00000125999 Spata6-010 processed_transcript Mus_musculus 0 390
ENSMUST00000137072 Spata6-011 processed_transcript Mus_musculus 0 220
ENSMUST00000132802 Spata6-012 processed_transcript Mus_musculus 2e-31 143

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