C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132952 USPL1 9606 + 13:30617693-30660770 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000255304 USPL1-001 30617783-30659549 protein_coding
  ENST00000465952 USPL1-002 30617693-30631474 processed_transcript
  ENST00000614860 USPL1-003 30617937-30660770 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000255304ENST00000465952ENST00000614860
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000255304 2.880±0.00 3.885±0.00 0.686±0.00 1.932±0.54 2.339±0.21 2.040±0.29 1.322±0.50 1.972±0.00 1.182±0.64 2.359±1.36 1.347±0.04 3.775±0.26 1.320±0.53 5.716±0.34
ENST00000465952 N/A N/A 0.991±0.00 3.463±0.00 4.930±0.00 2.873±0.00 1.405±0.00 2.540±0.00 6.628±0.00 6.472±0.00 1.013±0.00 7.670±0.00 N/A N/A
ENST00000614860 N/A 1.439±0.00 N/A 0.793±0.29 0.314±0.00 1.086±0.00 0.502±0.00 1.856±0.00 0.295±0.00 0.412±0.00 0.467±0.00 2.336±0.70 0.379±0.05 2.066±0.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CF CIL_0004CF_0001 CGP 13:30456704-30660770
CIL_0007UA CIL_0007UA_0001 VISTA 13:30490781-31093754
CIL_0004CN CIL_0004CN_0002 CGP 13:30617693-30764426

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0006508 IEA proteolysis
GO:0008283 IMP cell proliferation
GO:0015030 IDA Cajal body
GO:0016926 IDA protein desumoylation
GO:0030576 IMP Cajal body organization
GO:0032183 IDA SUMO binding
GO:0070140 IDA SUMO-specific isopeptidase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034825 uspl1 ubiquitin specific peptidase like 1 protein_coding Danio_rerio
ENSMUSG00000041264 Uspl1 ubiquitin specific peptidase like 1 protein_coding Mus_musculus

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