C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000614860 USPL1-003 ENSG00000132952 9606 + 13:30617937-30660770 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000614860
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000614860 1.439±0.00 0.793±0.29 0.314±0.00 1.086±0.00 0.502±0.00 1.856±0.00 0.295±0.00 0.412±0.00 0.467±0.00 2.336±0.70 0.379±0.05 2.066±0.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CF CIL_0004CF_0001 CGP 13:30456704-30660770
CIL_0007UA CIL_0007UA_0001 VISTA 13:30490781-31093754
CIL_0004CN CIL_0004CN_0002 CGP 13:30617693-30764426

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0006508 IEA proteolysis
GO:0008283 IMP cell proliferation
GO:0015030 IDA Cajal body
GO:0016926 IDA protein desumoylation
GO:0030576 IMP Cajal body organization
GO:0032183 IDA SUMO binding
GO:0070140 IDA SUMO-specific isopeptidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121416 Uspl1-006 protein_coding Mus_musculus 0 756
ENSMUST00000126168 Uspl1-005 nonsense_mediated_decay Mus_musculus 0 756
ENSMUST00000119685 Uspl1-004 protein_coding Mus_musculus 0 756
ENSMUST00000122160 Uspl1-002 protein_coding Mus_musculus 0 756
ENSMUST00000050472 Uspl1-001 protein_coding Mus_musculus 0 756
ENSMUST00000150921 Uspl1-008 retained_intron Mus_musculus 0 632
ENSMUST00000117878 Uspl1-007 protein_coding Mus_musculus 0 632
ENSMUST00000100410 Uspl1-003 protein_coding Mus_musculus 0 632

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