C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S6 kinase, 52kDa, polypeptide 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136643 RPS6KC1 9606 + 1:213051233-213274773 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000366959 RPS6KC1-002 213051255-213274773 protein_coding
  ENST00000366960 RPS6KC1-001 213051255-213274773 protein_coding
  ENST00000468069 RPS6KC1-004 213129527-213176704 processed_transcript
  ENST00000490299 RPS6KC1-003 213072938-213274773 processed_transcript
  ENST00000491616 RPS6KC1-005 213242060-213262816 processed_transcript
  ENST00000543354 RPS6KC1-201 213051233-213273464 protein_coding
  ENST00000543470 RPS6KC1-202 213051233-213273464 protein_coding
  ENST00000614059 RPS6KC1-203 213051233-213273464 protein_coding
  ENST00000615329 RPS6KC1-204 213051233-213273464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366959ENST00000366960ENST00000468069ENST00000490299ENST00000491616ENST00000543354ENST00000543470ENST00000614059ENST00000615329
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366959 N/A N/A N/A N/A N/A N/A N/A 0.613±0.00 N/A N/A 0.235±0.00 N/A N/A N/A
ENST00000366960 0.673±0.00 N/A 0.204±0.00 N/A 0.365±0.00 0.990±0.00 N/A N/A 0.173±0.00 1.014±0.00 0.162±0.00 1.344±0.42 0.534±0.17 1.437±0.07
ENST00000468069 N/A N/A 1.893±0.00 N/A N/A N/A N/A N/A N/A 2.852±0.00 N/A N/A N/A N/A
ENST00000490299 N/A N/A N/A 0.992±0.10 N/A N/A 0.208±0.00 N/A N/A 0.539±0.00 N/A 1.302±0.00 N/A N/A
ENST00000491616 N/A N/A 2.191±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543354 1.589±0.00 2.162±0.00 0.404±0.00 3.262±2.22 2.346±0.26 1.704±0.00 1.118±0.00 2.261±0.00 0.995±0.34 1.444±0.00 0.821±0.00 1.874±0.40 1.359±0.16 4.651±0.00
ENST00000543470 N/A N/A N/A 1.061±0.00 N/A N/A 0.667±0.18 N/A N/A N/A N/A N/A N/A 2.114±0.00
ENST00000614059 N/A N/A N/A 2.169±0.00 N/A N/A N/A 0.821±0.00 2.119±0.00 1.458±0.00 N/A 1.232±0.42 1.568±0.00 2.873±0.00
ENST00000615329 1.352±0.00 0.736±0.00 N/A 2.398±0.00 0.705±0.00 1.547±0.00 0.837±0.00 0.839±0.00 0.598±0.00 N/A 0.801±0.39 1.108±0.33 1.040±0.54 3.072±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00092Y CIL_00092Y_0001 VISTA 1:213024769-213627791

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005769 IDA early endosome
GO:0006468 IEA protein phosphorylation
GO:0007165 TAS signal transduction
GO:0016020 IEA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0035091 IEA phosphatidylinositol binding
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000089872 Rps6kc1 ribosomal protein S6 kinase polypeptide 1 protein_coding Mus_musculus

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