C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein S6 kinase, 52kDa, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490299 RPS6KC1-003 ENSG00000136643 9606 + 1:213072938-213274773 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLungOvaryENST00000490299
Transcript ID Brain Heart Lung Ovary
ENST00000490299 0.992±0.10 0.208±0.00 0.539±0.00 1.302±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00092Y CIL_00092Y_0001 VISTA 1:213024769-213627791

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061611 Rps6kc1-001 protein_coding Mus_musculus 0 1903
ENSMUST00000159367 Rps6kc1-006 nonsense_mediated_decay Mus_musculus 0 1903
ENSMUST00000162500 Rps6kc1-002 retained_intron Mus_musculus 0 1522
ENSMUST00000160889 Rps6kc1-005 nonsense_mediated_decay Mus_musculus 0 1146
ENSMUST00000159823 Rps6kc1-003 retained_intron Mus_musculus 0 857
ENSMUST00000160891 Rps6kc1-009 retained_intron Mus_musculus 0 244

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