C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: establishment of sister chromatid cohesion N-acetyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141446 ESCO1 9606 - 18:21529281-21600884 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000269214 ESCO1-001 21529281-21600736 protein_coding
  ENST00000383276 ESCO1-002 21529303-21600884 nonsense_mediated_decay
  ENST00000580101 ESCO1-003 21593043-21600704 processed_transcript
  ENST00000622333 ESCO1-201 21529310-21560981 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000269214ENST00000383276ENST00000580101ENST00000622333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000269214 1.057±0.00 0.889±0.00 0.177±0.00 0.931±0.63 0.795±0.00 1.286±0.00 0.959±0.48 1.184±0.16 0.997±0.78 1.806±0.73 0.688±0.15 1.403±0.19 1.174±0.77 7.810±2.83
ENST00000383276 N/A N/A N/A 0.338±0.00 0.723±0.00 0.758±0.00 N/A N/A 0.287±0.00 N/A 0.482±0.00 0.424±0.15 0.287±0.00 2.988±0.00
ENST00000580101 N/A N/A 4.241±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622333 N/A 1.955±0.00 N/A 0.726±0.00 N/A 0.852±0.00 N/A 2.309±0.00 0.705±0.00 1.001±0.00 0.678±0.16 2.055±0.00 0.597±0.29 5.018±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NU CIL_0005NU_0001 CGP 18:21242242-21600884
CIL_00084R CIL_00084R_0001 VISTA 18:21458991-22061961
CIL_0005CM CIL_0005CM_0001 CGP 18:21529281-21630456

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000785 IDA chromatin
GO:0005654 TAS nucleoplasm
GO:0006275 IMP regulation of DNA replication
GO:0007062 IEA sister chromatid cohesion
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0034421 IMP post-translational protein acetylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077057 esco1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein_coding Danio_rerio
ENSMUSG00000024293 Esco1 establishment of cohesion 1 homolog 1 (S. cerevisiae) protein_coding Mus_musculus

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