C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: establishment of sister chromatid cohesion N-acetyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622333 ESCO1-201 ENSG00000141446 9606 - 18:21529310-21560981 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000622333
Transcript ID Adrenal Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000622333 1.955±0.00 0.726±0.00 0.852±0.00 2.309±0.00 0.705±0.00 1.001±0.00 0.678±0.16 2.055±0.00 0.597±0.29 5.018±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NU CIL_0005NU_0001 CGP 18:21242242-21600884
CIL_00084R CIL_00084R_0001 VISTA 18:21458991-22061961
CIL_0005CM CIL_0005CM_0001 CGP 18:21529281-21630456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000785 IDA chromatin
GO:0005654 TAS nucleoplasm
GO:0006275 IMP regulation of DNA replication
GO:0007062 IEA sister chromatid cohesion
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0034421 IMP post-translational protein acetylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127099 Esco1-005 processed_transcript Mus_musculus 0 1860
ENSMUST00000115864 Esco1-004 protein_coding Mus_musculus 0 1485
ENSMUST00000145320 Esco1-003 processed_transcript Mus_musculus 0 1485
ENSMUST00000097670 Esco1-002 protein_coding Mus_musculus 0 1485
ENSMUST00000025142 Esco1-001 protein_coding Mus_musculus 0 1485

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