C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: establishment of sister chromatid cohesion N-acetyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000383276 ESCO1-002 ENSG00000141446 9606 - 18:21529303-21600884 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverMuscleOvaryPlacentaTestisENST00000383276
Transcript ID Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENST00000383276 0.338±0.00 0.723±0.00 0.758±0.00 0.287±0.00 0.482±0.00 0.424±0.15 0.287±0.00 2.988±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NU CIL_0005NU_0001 CGP 18:21242242-21600884
CIL_00084R CIL_00084R_0001 VISTA 18:21458991-22061961
CIL_0005CM CIL_0005CM_0001 CGP 18:21529281-21630456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000785 IDA chromatin
GO:0005654 TAS nucleoplasm
GO:0006275 IMP regulation of DNA replication
GO:0007062 IEA sister chromatid cohesion
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0034421 IMP post-translational protein acetylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127099 Esco1-005 processed_transcript Mus_musculus 0 2250
ENSMUST00000025142 Esco1-001 protein_coding Mus_musculus 0 1934
ENSMUST00000115864 Esco1-004 protein_coding Mus_musculus 0 1485
ENSMUST00000145320 Esco1-003 processed_transcript Mus_musculus 0 1485
ENSMUST00000097670 Esco1-002 protein_coding Mus_musculus 0 1485

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