C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005CM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141446-ENSG00000167088 CGP 9606 18:21529281-21630456
GeneTranscriptPositionBiotype
ENSG00000141446 (ESCO1)
establishment of sister chromatid cohesion N-acetyltransferase 1 		ENST00000269214 (ESCO1-001) 21529281-21600736 protein_coding
ENST00000383276 (ESCO1-002) 21529303-21600884 nonsense_mediated_decay
ENST00000580101 (ESCO1-003) 21593043-21600704 processed_transcript
ENST00000622333 (ESCO1-201) 21529310-21560981 protein_coding
ENSG00000167088 (SNRPD1)
small nuclear ribonucleoprotein D1 polypeptide 16kDa 		ENST00000300413 (SNRPD1-001) 21612267-21630456 protein_coding
ENST00000579618 (SNRPD1-003) 21612314-21629109 protein_coding
ENST00000582475 (SNRPD1-002) 21612331-21629479 protein_coding
CIL_0005CM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024293-ENSMUSG00000002477 CGP 10090 18:10566602-10628230
GeneTranscriptPositionBiotype
ENSMUSG00000002477 (Snrpd1)
small nuclear ribonucleoprotein D1 		ENSMUST00000002551 (Snrpd1-201) 10617796-10628230 protein_coding
ENSMUSG00000024293 (Esco1)
establishment of cohesion 1 homolog 1 (S. cerevisiae) 		ENSMUST00000025142 (Esco1-001) 10566619-10610352 protein_coding
ENSMUST00000097670 (Esco1-002) 10566611-10610129 protein_coding
ENSMUST00000115864 (Esco1-004) 10566619-10610109 protein_coding
ENSMUST00000127099 (Esco1-005) 10566602-10594055 processed_transcript
ENSMUST00000145320 (Esco1-003) 10566630-10610109 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005CM_0001ENSG00000141446ENST00000269214ENST00000383276ENST00000580101ENST00000622333ENSG00000167088ENST00000300413ENST00000579618ENST00000582475CIL_0005CM_0002ENSMUSG00000002477ENSMUST00000002551ENSMUSG00000024293ENSMUST00000025142ENSMUST00000097670ENSMUST00000115864ENSMUST00000127099ENSMUST00000145320
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005CM_0001ENSG00000141446ENST00000269214ENST00000383276ENST00000580101ENST00000622333ENSG00000167088ENST00000300413ENST00000579618ENST00000582475CIL_0005CM_0002ENSMUSG00000002477ENSMUST00000002551ENSMUSG00000024293ENSMUST00000025142ENSMUST00000097670ENSMUST00000115864ENSMUST00000127099ENSMUST00000145320
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141446 ENST00000269214 1.057±0.00 0.889±0.00 0.177±0.00 0.931±0.63 0.795±0.00 1.286±0.00 0.959±0.48 1.184±0.16 0.997±0.78 1.806±0.73 0.688±0.15 1.403±0.19 1.174±0.77 7.810±2.83
ENST00000383276 N/A N/A N/A 0.338±0.00 0.723±0.00 0.758±0.00 N/A N/A 0.287±0.00 N/A 0.482±0.00 0.424±0.15 0.287±0.00 2.988±0.00
ENST00000580101 N/A N/A 4.241±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622333 N/A 1.955±0.00 N/A 0.726±0.00 N/A 0.852±0.00 N/A 2.309±0.00 0.705±0.00 1.001±0.00 0.678±0.16 2.055±0.00 0.597±0.29 5.018±0.00
ENSG00000167088 ENST00000300413 2.818±0.00 6.435±0.00 N/A 5.605±0.11 2.060±0.29 2.457±0.04 1.345±0.69 2.548±1.05 1.993±0.00 1.393±0.18 1.388±0.33 13.995±11.30 16.300±11.05 17.267±11.21
ENST00000579618 5.905±0.00 N/A 5.297±0.00 N/A 6.897±0.03 11.723±0.00 3.022±0.94 10.963±0.00 9.019±2.95 7.338±4.39 5.869±0.00 23.989±18.02 28.131±6.94 24.745±5.76
ENST00000582475 6.653±0.00 13.199±0.00 1.480±0.00 3.998±1.90 4.452±0.00 5.313±2.74 1.328±0.96 5.575±0.00 3.016±1.73 3.674±0.00 1.409±0.00 12.404±0.00 13.609±1.56 12.065±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002477 ENSMUST00000002551 8.659±3.73 1.646±0.59 10.906±4.60 26.792±0.66 3.795±1.81 2.724±1.05 4.109±0.50 6.834±1.36 28.683±30.47 6.008±1.20 7.006±0.51 14.596±17.12 72.193±38.37 17.078±11.38
ENSMUSG00000024293 ENSMUST00000025142 0.741±0.19 0.928±0.06 2.064±0.26 1.540±0.47 0.912±0.36 0.576±0.14 0.445±0.13 0.486±0.07 1.324±0.72 0.991±0.11 0.879±0.19 1.405±0.86 4.605±1.16 1.182±0.42
ENSMUST00000097670 0.406±0.00 N/A 1.620±0.32 N/A N/A 0.965±0.00 0.520±0.25 0.660±0.21 0.892±0.61 0.436±0.00 0.797±0.20 N/A 2.212±0.18 N/A
ENSMUST00000115864 N/A N/A N/A N/A N/A N/A N/A N/A 1.004±0.39 N/A 0.597±0.22 0.956±0.00 2.853±0.48 N/A
ENSMUST00000127099 0.547±0.20 N/A 1.699±0.18 1.135±0.16 0.711±0.23 1.070±0.22 0.305±0.00 0.795±0.29 0.658±0.21 N/A 0.617±0.01 1.494±0.14 1.978±0.53 0.966±0.39
ENSMUST00000145320 0.598±0.21 N/A 1.233±0.00 0.907±0.23 0.464±0.00 1.177±0.52 0.512±0.00 0.637±0.09 0.874±0.32 0.611±0.08 0.783±0.18 N/A N/A 0.806±0.00

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