C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: establishment of cohesion 1 homolog 1 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024293 Esco1 10090 - 18:10566602-10610352 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025142 Esco1-001 10566619-10610352 protein_coding
  ENSMUST00000097670 Esco1-002 10566611-10610129 protein_coding
  ENSMUST00000115864 Esco1-004 10566619-10610109 protein_coding
  ENSMUST00000127099 Esco1-005 10566602-10594055 processed_transcript
  ENSMUST00000145320 Esco1-003 10566630-10610109 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025142ENSMUST00000097670ENSMUST00000115864ENSMUST00000127099ENSMUST00000145320
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025142 0.741±0.19 0.928±0.06 2.064±0.26 1.540±0.47 0.912±0.36 0.576±0.14 0.445±0.13 0.486±0.07 1.324±0.72 0.991±0.11 0.879±0.19 1.405±0.86 4.605±1.16 1.182±0.42
ENSMUST00000097670 0.406±0.00 N/A 1.620±0.32 N/A N/A 0.965±0.00 0.520±0.25 0.660±0.21 0.892±0.61 0.436±0.00 0.797±0.20 N/A 2.212±0.18 N/A
ENSMUST00000115864 N/A N/A N/A N/A N/A N/A N/A N/A 1.004±0.39 N/A 0.597±0.22 0.956±0.00 2.853±0.48 N/A
ENSMUST00000127099 0.547±0.20 N/A 1.699±0.18 1.135±0.16 0.711±0.23 1.070±0.22 0.305±0.00 0.795±0.29 0.658±0.21 N/A 0.617±0.01 1.494±0.14 1.978±0.53 0.966±0.39
ENSMUST00000145320 0.598±0.21 N/A 1.233±0.00 0.907±0.23 0.464±0.00 1.177±0.52 0.512±0.00 0.637±0.09 0.874±0.32 0.611±0.08 0.783±0.18 N/A N/A 0.806±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NU CIL_0005NU_0002 CGP 18:10325177-10610352
CIL_00084R CIL_00084R_0002 VISTA 18:10435381-11036621
CIL_0005CM CIL_0005CM_0002 CGP 18:10566602-10628230

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 ISS chromatin
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0006275 ISS regulation of DNA replication
GO:0007062 IEA sister chromatid cohesion
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0034421 IEA post-translational protein acetylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077057 esco1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein_coding Danio_rerio
ENSG00000141446 ESCO1 establishment of sister chromatid cohesion N-acetyltransferase 1 protein_coding Homo_sapiens

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