C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor type, G
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144724 PTPRG 9606 + 3:61561569-62297613 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295874 PTPRG-002 61561911-62293329 protein_coding
  ENST00000468576 PTPRG-008 62243805-62263465 retained_intron
  ENST00000474889 PTPRG-001 61561911-62297613 protein_coding
  ENST00000475012 PTPRG-005 62217583-62293551 processed_transcript
  ENST00000475527 PTPRG-003 61561851-61751049 processed_transcript
  ENST00000485215 PTPRG-007 62243576-62267813 processed_transcript
  ENST00000495879 PTPRG-006 61561569-61771395 processed_transcript
  ENST00000615556 PTPRG-201 61989621-62294898 protein_coding
  ENST00000618938 PTPRG-202 61989621-62294898 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295874ENST00000474889ENST00000475012ENST00000475527ENST00000495879
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295874 N/A 3.194±0.00 2.599±0.00 4.293±0.00 3.634±0.00 2.248±0.30 2.368±0.00 1.769±1.08 8.137±0.00 N/A 3.321±2.50 2.308±0.00 2.919±0.00
ENST00000474889 2.775±0.00 N/A 3.196±1.38 4.265±0.00 5.882±0.00 0.782±0.09 5.413±5.01 1.039±0.25 1.511±0.00 N/A 0.613±0.32 1.612±0.92 4.519±1.50
ENST00000475012 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.409±0.00 0.798±0.00 N/A 3.139±0.00
ENST00000475527 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.801±0.00 N/A N/A N/A
ENST00000495879 N/A 2.771±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QX CIL_0008QX_0001 VISTA 3:61508217-62112191
CIL_00034G CIL_00034G_0001 CGP 3:61561569-62336213

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IDA:IEA protein tyrosine phosphatase activity
GO:0005001 TAS transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 IPI:IEA protein binding
GO:0005615 IEA extracellular space
GO:0005887 TAS integral component of plasma membrane
GO:0006470 IEA protein dephosphorylation
GO:0007169 TAS transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007420 IEA brain development
GO:0010633 IMP negative regulation of epithelial cell migration
GO:0010977 IEA negative regulation of neuron projection development
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0042802 IPI identical protein binding
GO:0070062 IDA extracellular vesicular exosome
GO:1901998 IEA toxin transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045006 ptprga protein tyrosine phosphatase, receptor type, g a protein_coding Danio_rerio
ENSDARG00000060123 ca16b carbonic anhydrase XVI b protein_coding Danio_rerio
ENSMUSG00000021745 Ptprg protein tyrosine phosphatase, receptor type, G protein_coding Mus_musculus

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