C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, G
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495879 PTPRG-006 ENSG00000144724 9606 + 3:61561569-61771395 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000495879
Transcript ID Bladder
ENST00000495879 2.771±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QX CIL_0008QX_0001 VISTA 3:61508217-62112191
CIL_00034G CIL_00034G_0001 CGP 3:61561569-62336213

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022264 Ptprg-001 protein_coding Mus_musculus 0 1033
ENSMUST00000142917 Ptprg-002 nonsense_mediated_decay Mus_musculus 0 994
ENSMUST00000148113 Ptprg-003 retained_intron Mus_musculus 0 952

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