C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: scavenger receptor cysteine rich family, 4 domains
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000146700 SSC4D 9606 - 7:76389334-76409695 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000275560 SSC4D-001 76389334-76409695 protein_coding
  ENST00000492979 SSC4D-003 76389334-76393490 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000275560ENST00000492979
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000275560 0.150±0.00 0.278±0.00 N/A 0.988±0.00 N/A 0.041±0.00 2.074±0.00 N/A N/A N/A 1.200±1.28 0.090±0.03 0.246±0.00
ENST00000492979 0.363±0.00 N/A 0.325±0.15 3.574±0.00 0.192±0.00 0.210±0.17 1.381±0.00 2.002±0.00 0.223±0.00 0.572±0.00 1.822±0.28 0.371±0.03 0.840±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006E6 CIL_0006E6_0001 CGP 7:76326794-76409695
CIL_0006E7 CIL_0006E7_0001 CGP 7:76389334-76442071

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060592 SSC4D scavenger receptor cysteine rich family, 4 domains protein_coding Danio_rerio
ENSMUSG00000029699 Srcrb4d scavenger receptor cysteine rich family, 4 domains protein_coding Mus_musculus

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