C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scavenger receptor cysteine rich family, 4 domains
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492979 SSC4D-003 ENSG00000146700 9606 - 7:76389334-76393490 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000492979
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000492979 0.363±0.00 0.325±0.15 3.574±0.00 0.192±0.00 0.210±0.17 1.381±0.00 2.002±0.00 0.223±0.00 0.572±0.00 1.822±0.28 0.371±0.03 0.840±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006E6 CIL_0006E6_0001 CGP 7:76326794-76409695
CIL_0006E7 CIL_0006E7_0001 CGP 7:76389334-76442071

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111152 Srcrb4d-001 protein_coding Mus_musculus 0 492
ENSMUST00000111153 Srcrb4d-002 protein_coding Mus_musculus 0 492
ENSMUST00000054895 Srcrb4d-003 protein_coding Mus_musculus 0 455
ENSMUST00000111150 Srcrb4d-004 protein_coding Mus_musculus 0 359

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