C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scavenger receptor cysteine rich family, 4 domains
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000275560 SSC4D-001 ENSG00000146700 9606 - 7:76389334-76409695 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartKidneyOvaryPlacentaTestisENST00000275560
Transcript ID Adipose Bladder Breast Heart Kidney Ovary Placenta Testis
ENST00000275560 0.150±0.00 0.278±0.00 0.988±0.00 0.041±0.00 2.074±0.00 1.200±1.28 0.090±0.03 0.246±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006E6 CIL_0006E6_0001 CGP 7:76326794-76409695
CIL_0006E7 CIL_0006E7_0001 CGP 7:76389334-76442071

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0006898 IEA receptor-mediated endocytosis
GO:0016020 IEA membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111153 Srcrb4d-002 protein_coding Mus_musculus 0 1812
ENSMUST00000111152 Srcrb4d-001 protein_coding Mus_musculus 0 1694
ENSMUST00000054895 Srcrb4d-003 protein_coding Mus_musculus 0 457
ENSMUST00000111150 Srcrb4d-004 protein_coding Mus_musculus 0 359
ENSMUST00000153823 Srcrb4d-007 protein_coding Mus_musculus 0 331

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