C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidic acid phosphatase type 2 domain containing 1B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147535 PPAPDC1B 9606 - 8:38263130-38269243 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000419686 PPAPDC1B-003 38266980-38269243 protein_coding
  ENST00000422581 PPAPDC1B-002 38264739-38269207 protein_coding
  ENST00000424479 PPAPDC1B-001 38263130-38269220 protein_coding
  ENST00000524409 PPAPDC1B-008 38268619-38269201 retained_intron
  ENST00000524616 PPAPDC1B-007 38264351-38269196 protein_coding
  ENST00000527758 PPAPDC1B-010 38264739-38265622 processed_transcript
  ENST00000527793 PPAPDC1B-014 38267181-38268939 processed_transcript
  ENST00000528814 PPAPDC1B-004 38267001-38269230 retained_intron
  ENST00000529359 PPAPDC1B-005 38263130-38269140 protein_coding
  ENST00000530193 PPAPDC1B-013 38263138-38267322 processed_transcript
  ENST00000530432 PPAPDC1B-012 38264317-38266459 retained_intron
  ENST00000531109 PPAPDC1B-016 38264543-38269175 nonsense_mediated_decay
  ENST00000531483 PPAPDC1B-009 38266980-38267736 processed_transcript
  ENST00000531823 PPAPDC1B-015 38264398-38269174 protein_coding
  ENST00000534339 PPAPDC1B-006 38264433-38269180 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000419686ENST00000422581ENST00000424479ENST00000527793ENST00000528814ENST00000529359ENST00000530193ENST00000531483
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000419686 N/A N/A N/A N/A 3.060±0.00 N/A N/A N/A 6.704±0.00 N/A N/A 13.432±0.00 6.220±1.21 4.326±0.00
ENST00000422581 N/A N/A N/A 0.431±0.00 N/A N/A N/A N/A N/A 0.502±0.00 N/A N/A 2.857±0.00 1.773±0.00
ENST00000424479 4.459±0.00 N/A 1.365±0.00 1.819±0.96 3.379±0.00 0.650±0.00 1.580±0.98 N/A 5.202±2.38 0.783±0.00 0.277±0.00 4.529±2.18 3.799±0.07 1.855±0.31
ENST00000527793 N/A N/A N/A N/A N/A 5.789±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528814 N/A N/A 0.699±0.00 1.170±0.43 N/A 1.753±0.00 N/A 6.115±0.00 N/A 0.603±0.00 N/A 5.625±3.47 1.800±0.00 1.500±0.00
ENST00000529359 2.057±0.00 5.079±0.00 N/A 0.875±0.00 1.419±0.00 1.482±0.00 N/A 6.486±0.00 N/A N/A N/A 2.437±0.01 N/A 2.426±0.00
ENST00000530193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.084±0.00 N/A N/A
ENST00000531483 N/A N/A N/A N/A 5.387±0.00 N/A N/A N/A N/A N/A 1.874±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NR CIL_0008NR_0001 VISTA 8:38140056-38746180
CIL_0003YZ CIL_0003YZ_0002 CGP 8:38225218-38275558
CIL_0008SM CIL_0008SM_0001 VISTA 8:38252496-38854674
CIL_0008H7 CIL_0008H7_0001 VISTA 8:38253282-38854976
CIL_0003Z2 CIL_0003Z2_0002 CGP 8:38263130-38382272

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005737 TAS cytoplasm
GO:0005886 TAS plasma membrane
GO:0008195 IDA phosphatidate phosphatase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0046839 IDA phospholipid dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057672 ppapdc1b phosphatidic acid phosphatase type 2 domain containing 1B protein_coding Danio_rerio
ENSMUSG00000031570 Ppapdc1b phosphatidic acid phosphatase type 2 domain containing 1B protein_coding Mus_musculus

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