C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor subfamily 3, group C, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151623 NR3C2 9606 - 4:148078762-148444698 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342437 NR3C2-002 148080867-148442371 nonsense_mediated_decay
  ENST00000344721 NR3C2-001 148078762-148444698 protein_coding
  ENST00000358102 NR3C2-003 148078769-148442520 protein_coding
  ENST00000503174 NR3C2-008 148152417-148154844 retained_intron
  ENST00000503313 NR3C2-007 148146588-148201132 processed_transcript
  ENST00000504753 NR3C2-006 148194771-148368470 processed_transcript
  ENST00000511528 NR3C2-009 148081344-148436860 protein_coding
  ENST00000512865 NR3C2-004 148080193-148442224 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342437ENST00000344721ENST00000358102ENST00000511528
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342437 N/A 4.699±0.00 N/A N/A 5.295±0.00 N/A N/A N/A 0.568±0.00 1.520±0.00 N/A 0.197±0.00 1.610±0.00
ENST00000344721 0.527±0.00 N/A N/A N/A N/A N/A N/A 0.770±0.38 N/A N/A N/A N/A N/A
ENST00000358102 0.502±0.00 2.186±0.00 3.391±0.89 0.466±0.00 1.501±0.72 2.163±0.56 0.890±0.00 1.463±0.85 N/A 0.606±0.00 1.839±0.95 0.457±0.11 N/A
ENST00000511528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A 1.628±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006M2 CIL_0006M2_0002 CGP 4:147732063-148444698
CIL_0007S9 CIL_0007S9_0001 VISTA 4:147752009-148356122
CIL_000649 CIL_000649_0002 CGP 4:148078762-150257457

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005496 IEA steroid binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0006883 IEA cellular sodium ion homeostasis
GO:0007165 TAS signal transduction
GO:0007588 IEA excretion
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression
GO:0016020 IEA membrane
GO:0043235 IDA receptor complex
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037025 nr3c2 nuclear receptor subfamily 3, group C, member 2 protein_coding Danio_rerio
ENSMUSG00000031618 Nr3c2 nuclear receptor subfamily 3, group C, member 2 protein_coding Mus_musculus

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