C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 3, group C, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358102 NR3C2-003 ENSG00000151623 9606 - 4:148078769-148442520 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENST00000358102
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000358102 0.502±0.00 2.186±0.00 3.391±0.89 0.466±0.00 1.501±0.72 2.163±0.56 0.890±0.00 1.463±0.85 0.606±0.00 1.839±0.95 0.457±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006M2 CIL_0006M2_0002 CGP 4:147732063-148444698
CIL_0007S9 CIL_0007S9_0001 VISTA 4:147752009-148356122
CIL_000649 CIL_000649_0002 CGP 4:148078762-150257457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005496 IEA steroid binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006883 IEA cellular sodium ion homeostasis
GO:0007588 IEA excretion
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109912 Nr3c2-002 protein_coding Mus_musculus 0 5228
ENSMUST00000109913 Nr3c2-001 protein_coding Mus_musculus 0 4905
ENSMUST00000034031 Nr3c2-005 protein_coding Mus_musculus 0 3197
ENSMUST00000148106 Nr3c2-003 nonsense_mediated_decay Mus_musculus 0 2538
ENSMUST00000109911 Nr3c2-004 protein_coding Mus_musculus 0 2292
ENSMUST00000128862 Nr3c2-008 protein_coding Mus_musculus 0 481
ENSMUST00000115571 Nr3c1-201 protein_coding Mus_musculus 0 193
ENSMUST00000025300 Nr3c1-002 protein_coding Mus_musculus 0 193
ENSMUST00000115567 Nr3c1-001 protein_coding Mus_musculus 0 193
ENSMUST00000097592 Nr3c1-004 protein_coding Mus_musculus 9.94922e-44 183
ENSMUST00000143284 Nr3c2-006 protein_coding Mus_musculus 1.99965e-42 180
ENSMUST00000152853 Nr3c1-003 protein_coding Mus_musculus 6e-32 145

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