Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	nuclear receptor subfamily 3, group C, member 2
ENST00000342437	NR3C2-002	ENSG00000151623	9606	-	4:148080867-148442371	nonsense_mediated_decay

Expression Patterns

Transcript ID	Bladder	Colon	Lung	Muscle	Placenta	Testis
ENST00000342437	4.699±0.00	5.295±0.00	0.568±0.00	1.520±0.00	0.197±0.00	1.610±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0006M2	CIL_0006M2_0002	CGP	4:147732063-148444698
CIL_0007S9	CIL_0007S9_0001	VISTA	4:147752009-148356122
CIL_000649	CIL_000649_0002	CGP	4:148078762-150257457

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003700	IEA	sequence-specific DNA binding transcription factor activity
GO:0005634	IEA	nucleus
GO:0006351	IEA	transcription, DNA-templated
GO:0006355	IEA	regulation of transcription, DNA-templated
GO:0008270	IEA	zinc ion binding
GO:0043565	IEA	sequence-specific DNA binding

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000148106	Nr3c2-003	nonsense_mediated_decay	Mus_musculus	0	3437
ENSMUST00000109912	Nr3c2-002	protein_coding	Mus_musculus	0	2483
ENSMUST00000109911	Nr3c2-004	protein_coding	Mus_musculus	0	2292
ENSMUST00000109913	Nr3c2-001	protein_coding	Mus_musculus	0	2215
ENSMUST00000034031	Nr3c2-005	protein_coding	Mus_musculus	0	2163
ENSMUST00000128862	Nr3c2-008	protein_coding	Mus_musculus	0	481
ENSMUST00000115571	Nr3c1-201	protein_coding	Mus_musculus	0	193
ENSMUST00000025300	Nr3c1-002	protein_coding	Mus_musculus	0	193
ENSMUST00000115567	Nr3c1-001	protein_coding	Mus_musculus	0	193
ENSMUST00000097592	Nr3c1-004	protein_coding	Mus_musculus	7.00649e-44	183
ENSMUST00000143284	Nr3c2-006	protein_coding	Mus_musculus	8.99634e-43	180
ENSMUST00000152853	Nr3c1-003	protein_coding	Mus_musculus	3e-32	145

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