C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006M2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078326-ENSDARG00000037025 CGP 7955 1:36480069-36936660
GeneTranscriptPositionBiotype
ENSDARG00000036755 (prmt10)
protein arginine methyltransferase 10 (putative) 		ENSDART00000053369 (prmt10-001) 36454193-36480262 protein_coding
ENSDART00000148386 (prmt10-002) 36478978-36479827 protein_coding
ENSDARG00000078326 (arhgap10)
Rho GTPase activating protein 10 		ENSDART00000109314 (arhgap10-201) 36480191-36621188 protein_coding
ENSDART00000148640 (arhgap10-001) 36620041-36621189 protein_coding
ENSDART00000149022 (arhgap10-002) 36480069-36538290 protein_coding
CIL_0006M2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000071205-ENSG00000151623 CGP 9606 4:147732063-148444698
GeneTranscriptPositionBiotype
ENSG00000071205 (ARHGAP10)
Rho GTPase activating protein 10 		ENST00000336498 (ARHGAP10-001) 147732063-148072780 protein_coding
ENST00000506020 (ARHGAP10-005) 147946239-148072776 retained_intron
ENST00000506054 (ARHGAP10-003) 147860983-148072776 retained_intron
ENST00000507661 (ARHGAP10-004) 147881867-148072775 protein_coding
ENST00000510076 (ARHGAP10-007) 148065240-148072376 processed_transcript
ENST00000510379 (ARHGAP10-002) 147732063-147858488 retained_intron
ENST00000513548 (ARHGAP10-006) 148023054-148063277 retained_intron
ENSG00000151623 (NR3C2)
nuclear receptor subfamily 3, group C, member 2 		ENST00000342437 (NR3C2-002) 148080867-148442371 nonsense_mediated_decay
ENST00000344721 (NR3C2-001) 148078762-148444698 protein_coding
ENST00000358102 (NR3C2-003) 148078769-148442520 protein_coding
ENST00000503174 (NR3C2-008) 148152417-148154844 retained_intron
ENST00000503313 (NR3C2-007) 148146588-148201132 processed_transcript
ENST00000504753 (NR3C2-006) 148194771-148368470 processed_transcript
ENST00000511528 (NR3C2-009) 148081344-148436860 protein_coding
ENST00000512865 (NR3C2-004) 148080193-148442224 protein_coding
ENSG00000240014 (RN7SL254P)
RNA, 7SL, cytoplasmic 254, pseudogene 		ENST00000460609 (RN7SL254P-201) 147808926-147809209 misc_RNA
ENSG00000250354 (RP11-76G10.1)
 ENST00000514843 (RP11-76G10.1-001) 148146471-148208880 antisense
ENSG00000252951 (RNA5SP165)
RNA, 5S ribosomal pseudogene 165 		ENST00000517142 (RNA5SP165-201) 147745303-147745417 rRNA
ENSG00000270387 (RP11-315D13.1)
 ENST00000604653 (RP11-315D13.1-001) 147916529-147917386 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006M2_0001ENSDARG00000036755ENSDART00000053369ENSDART00000148386ENSDARG00000078326ENSDART00000109314ENSDART00000148640ENSDART00000149022CIL_0006M2_0002ENSG00000071205ENST00000336498ENST00000506020ENST00000506054ENST00000507661ENST00000510076ENST00000510379ENST00000513548ENSG00000151623ENST00000342437ENST00000344721ENST00000358102ENST00000503174ENST00000503313ENST00000504753ENST00000511528ENST00000512865ENSG00000240014ENST00000460609ENSG00000250354ENST00000514843ENSG00000252951ENST00000517142ENSG00000270387ENST00000604653
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006M2_0001ENSDARG00000036755ENSDART00000053369ENSDARG00000078326ENSDART00000109314ENSDART00000148640CIL_0006M2_0002ENSG00000071205ENST00000336498ENST00000506054ENST00000507661ENSG00000151623ENST00000342437ENST00000344721ENST00000358102ENST00000511528ENSG00000240014ENST00000460609ENSG00000250354ENST00000514843ENSG00000252951ENST00000517142ENSG00000270387ENST00000604653
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036755 ENSDART00000053369 N/A N/A N/A 2.673±0.00 N/A N/A N/A 3.617±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000148386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000078326 ENSDART00000109314 N/A N/A N/A 4.077±1.18 N/A N/A 7.395±0.27 9.823±0.00 0.902±0.00 N/A 5.549±0.00 N/A N/A N/A
ENSDART00000148640 N/A N/A N/A 8.992±0.89 N/A N/A 17.059±2.63 20.547±3.28 N/A N/A N/A N/A N/A N/A
ENSDART00000149022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071205 ENST00000336498 8.191±0.00 4.524±0.00 0.510±0.00 3.250±2.30 6.210±3.90 12.432±0.00 9.231±1.67 2.589±0.00 14.357±13.47 3.393±0.00 7.643±4.44 6.618±1.71 7.168±3.73 10.094±4.18
ENST00000506020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506054 N/A N/A 0.269±0.00 0.079±0.00 0.573±0.00 0.896±0.00 0.868±0.00 0.113±0.00 3.852±0.00 N/A N/A N/A N/A N/A
ENST00000507661 2.629±0.00 3.572±0.00 N/A 0.396±0.00 5.433±0.00 8.075±0.00 2.928±0.00 3.055±0.00 N/A 2.310±0.00 5.913±0.00 4.553±2.56 3.263±0.84 3.982±0.52
ENST00000510076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151623 ENST00000342437 N/A N/A 4.699±0.00 N/A N/A 5.295±0.00 N/A N/A N/A 0.568±0.00 1.520±0.00 N/A 0.197±0.00 1.610±0.00
ENST00000344721 0.527±0.00 N/A N/A N/A N/A N/A N/A N/A 0.770±0.38 N/A N/A N/A N/A N/A
ENST00000358102 0.502±0.00 N/A 2.186±0.00 3.391±0.89 0.466±0.00 1.501±0.72 2.163±0.56 0.890±0.00 1.463±0.85 N/A 0.606±0.00 1.839±0.95 0.457±0.11 N/A
ENST00000503174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A 1.628±0.00
ENST00000512865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240014 ENST00000460609 N/A 0.065±0.00 N/A N/A N/A N/A 0.133±0.07 N/A 1.130±0.00 N/A N/A N/A N/A N/A
ENSG00000250354 ENST00000514843 N/A 0.046±0.00 N/A 0.073±0.00 0.138±0.09 N/A N/A N/A N/A N/A N/A 0.360±0.00 N/A N/A
ENSG00000252951 ENST00000517142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.438±0.00 N/A 0.812±0.00
ENSG00000270387 ENST00000604653 N/A 0.122±0.00 0.241±0.00 0.057±0.00 0.515±0.00 N/A 0.651±0.48 0.674±0.00 1.508±0.00 N/A N/A 0.094±0.05 N/A 0.047±0.00

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