C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromodomain protein, Y-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000153046 CDYL 9606 + 6:4706159-4955551 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328908 CDYL-001 4706159-4955547 protein_coding
  ENST00000343762 CDYL-003 4889992-4955551 protein_coding
  ENST00000397588 CDYL-006 4776435-4954256 protein_coding
  ENST00000440139 CDYL-009 4772971-4943597 protein_coding
  ENST00000449732 CDYL-007 4836098-4954373 protein_coding
  ENST00000469671 CDYL-011 4928695-4943813 retained_intron
  ENST00000472453 CDYL-008 4776442-4954510 processed_transcript
  ENST00000483019 CDYL-010 4773041-4892347 processed_transcript
  ENST00000491864 CDYL-004 4715841-4892112 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328908ENST00000343762ENST00000397588ENST00000449732ENST00000483019ENST00000491864
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.785±0.41
ENST00000343762 0.695±0.00 2.603±0.00 N/A 2.219±0.35 N/A 2.774±1.84 0.471±0.00 3.750±0.00 N/A 1.937±0.00 0.581±0.00 2.507±0.96 8.632±0.41 N/A
ENST00000397588 5.921±0.00 2.525±0.00 1.113±0.00 4.183±0.00 2.210±0.38 2.267±0.89 2.315±0.00 2.184±0.00 1.442±0.15 5.478±0.00 3.239±2.09 4.697±3.07 7.743±6.06 3.529±0.27
ENST00000449732 N/A N/A N/A N/A N/A N/A 0.409±0.00 N/A N/A N/A N/A 1.821±0.36 N/A N/A
ENST00000483019 N/A N/A 1.472±0.00 19.170±0.00 7.885±0.00 4.500±0.00 1.309±0.00 3.761±0.00 7.481±0.00 4.982±0.00 N/A 6.219±0.00 N/A N/A
ENST00000491864 N/A N/A 1.889±0.00 5.707±0.00 N/A 7.881±0.00 3.804±0.00 6.939±0.00 11.942±0.00 2.250±0.00 3.854±0.00 14.481±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IM CIL_0003IM_0001 CGP 6:4115689-4955551
CIL_000162 CIL_000162_0002 CGP 6:4706159-5004063

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003714 IMP transcription corepressor activity
GO:0003824 IEA catalytic activity
GO:0004402 IEA histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007283 TAS spermatogenesis
GO:0008152 IEA metabolic process
GO:0016573 IEA histone acetylation
GO:0035064 IDA methylated histone binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038985 cdyl chromodomain protein, Y-like protein_coding Danio_rerio
ENSMUSG00000059288 Cdyl chromodomain protein, Y chromosome-like protein_coding Mus_musculus

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