C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromodomain protein, Y-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397588 CDYL-006 ENSG00000153046 9606 + 6:4776435-4954256 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397588
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397588 5.921±0.00 2.525±0.00 1.113±0.00 4.183±0.00 2.210±0.38 2.267±0.89 2.315±0.00 2.184±0.00 1.442±0.15 5.478±0.00 3.239±2.09 4.697±3.07 7.743±6.06 3.529±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IM CIL_0003IM_0001 CGP 6:4115689-4955551
CIL_000162 CIL_000162_0002 CGP 6:4706159-5004063

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003714 IMP transcription corepressor activity
GO:0003824 IEA catalytic activity
GO:0004402 IEA histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007283 TAS spermatogenesis
GO:0008152 IEA metabolic process
GO:0016573 IEA histone acetylation
GO:0035064 IDA methylated histone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163595 Cdyl-202 protein_coding Mus_musculus 0 2111
ENSMUST00000075220 Cdyl-201 protein_coding Mus_musculus 0 1794
ENSMUST00000175829 Gm7584-001 processed_pseudogene Mus_musculus 0 983

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