C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000162_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000038985-ENSDARG00000017605 CGP 7955 2:24186724-24251106
GeneTranscriptPositionBiotype
ENSDARG00000017605 (rpp40)
ribonuclease P 40 subunit 		ENSDART00000026694 (rpp40-001) 24243927-24251106 protein_coding
ENSDART00000146839 (rpp40-002) 24243923-24251040 retained_intron
ENSDARG00000034189 (oxsr1a)
oxidative-stress responsive 1a 		ENSDART00000047073 (oxsr1a-001) 24137541-24162533 protein_coding
ENSDART00000153918 (oxsr1a-002) 24150386-24186967 protein_coding
ENSDARG00000038985 (cdyl)
chromodomain protein, Y-like 		ENSDART00000079131 (cdyl-001) 24186724-24241358 protein_coding
CIL_000162_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153046-ENSG00000124787 CGP 9606 6:4706159-5004063
GeneTranscriptPositionBiotype
ENSG00000124787 (RPP40)
ribonuclease P/MRP 40kDa subunit 		ENST00000319533 (RPP40-002) 4995047-5004036 protein_coding
ENST00000380051 (RPP40-001) 4994732-5004047 protein_coding
ENST00000464646 (RPP40-006) 4995078-5003658 protein_coding
ENST00000468105 (RPP40-004) 4998688-5004047 retained_intron
ENST00000479782 (RPP40-005) 4998828-5004018 nonsense_mediated_decay
ENST00000483546 (RPP40-003) 5001776-5004063 retained_intron
ENST00000618533 (RPP40-201) 4995049-5004063 protein_coding
ENSG00000153046 (CDYL)
chromodomain protein, Y-like 		ENST00000328908 (CDYL-001) 4706159-4955547 protein_coding
ENST00000343762 (CDYL-003) 4889992-4955551 protein_coding
ENST00000397588 (CDYL-006) 4776435-4954256 protein_coding
ENST00000440139 (CDYL-009) 4772971-4943597 protein_coding
ENST00000449732 (CDYL-007) 4836098-4954373 protein_coding
ENST00000469671 (CDYL-011) 4928695-4943813 retained_intron
ENST00000472453 (CDYL-008) 4776442-4954510 processed_transcript
ENST00000483019 (CDYL-010) 4773041-4892347 processed_transcript
ENST00000491864 (CDYL-004) 4715841-4892112 processed_transcript
ENSG00000217030 (RP11-428J1.2)
 ENST00000404109 (RP11-428J1.2-001) 4979072-4979494 processed_pseudogene
ENSG00000236336 (RP3-430A16.1)
 ENST00000436283 (RP3-430A16.1-001) 4774526-4775408 antisense
CIL_000162_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059288-ENSMUSG00000021418 CGP 10090 13:35659862-35906359
GeneTranscriptPositionBiotype
ENSMUSG00000021418 (Rpp40)
ribonuclease P 40 subunit 		ENSMUST00000171686 (Rpp40-001) 35893472-35906359 protein_coding
ENSMUST00000174230 (Rpp40-002) 35896715-35906344 protein_coding
ENSMUST00000174231 (Rpp40-004) 35896704-35898868 protein_coding
ENSMUST00000174852 (Rpp40-003) 35896712-35906328 retained_intron
ENSMUSG00000059288 (Cdyl)
chromodomain protein, Y chromosome-like 		ENSMUST00000075220 (Cdyl-201) 35659862-35874064 protein_coding
ENSMUST00000163595 (Cdyl-202) 35741313-35874058 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000162_0001ENSDARG00000017605ENSDART00000026694ENSDART00000146839ENSDARG00000034189ENSDART00000047073ENSDART00000153918ENSDARG00000038985ENSDART00000079131CIL_000162_0002ENSG00000124787ENST00000319533ENST00000380051ENST00000464646ENST00000468105ENST00000479782ENST00000483546ENST00000618533ENSG00000153046ENST00000328908ENST00000343762ENST00000397588ENST00000440139ENST00000449732ENST00000469671ENST00000472453ENST00000483019ENST00000491864ENSG00000217030ENST00000404109ENSG00000236336ENST00000436283CIL_000162_0003ENSMUSG00000021418ENSMUST00000171686ENSMUST00000174230ENSMUST00000174231ENSMUST00000174852ENSMUSG00000059288ENSMUST00000075220ENSMUST00000163595
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000162_0001ENSDARG00000017605ENSDART00000026694ENSDART00000146839ENSDARG00000034189ENSDART00000047073ENSDARG00000038985ENSDART00000079131CIL_000162_0002ENSG00000124787ENST00000319533ENST00000380051ENST00000464646ENST00000468105ENST00000479782ENST00000618533ENSG00000153046ENST00000328908ENST00000343762ENST00000397588ENST00000449732ENST00000483019ENST00000491864ENSG00000217030ENST00000404109ENSG00000236336ENST00000436283CIL_000162_0003ENSMUSG00000021418ENSMUST00000171686ENSMUST00000174230ENSMUST00000174231ENSMUST00000174852ENSMUSG00000059288ENSMUST00000075220ENSMUST00000163595
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017605 ENSDART00000026694 N/A N/A N/A 0.880±0.56 N/A N/A 1.920±0.00 9.233±0.00 4.666±0.00 N/A N/A N/A N/A N/A
ENSDART00000146839 N/A N/A N/A N/A N/A N/A 2.313±0.00 N/A N/A N/A 1.137±0.00 N/A N/A N/A
ENSDARG00000034189 ENSDART00000047073 N/A N/A N/A 8.628±1.11 N/A N/A 6.997±4.56 3.228±0.23 0.613±0.00 N/A 1.498±0.00 N/A N/A N/A
ENSDART00000153918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000038985 ENSDART00000079131 N/A N/A N/A 1.511±0.00 N/A N/A 1.813±0.84 1.986±0.00 0.338±0.00 N/A 0.634±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124787 ENST00000319533 1.234±0.00 2.395±0.00 N/A 0.707±0.00 1.209±0.00 0.469±0.15 N/A 1.073±0.00 1.237±0.00 N/A N/A 0.648±0.02 0.948±0.02 1.064±0.00
ENST00000380051 N/A N/A N/A 0.091±0.00 N/A N/A 0.037±0.00 N/A 0.625±0.00 0.146±0.00 N/A 0.370±0.00 N/A 0.256±0.00
ENST00000464646 N/A N/A 0.986±0.00 N/A 0.738±0.08 N/A 0.053±0.00 0.305±0.00 N/A 0.267±0.00 N/A 0.853±0.28 0.405±0.11 0.817±0.41
ENST00000468105 N/A N/A N/A 1.216±0.00 N/A 0.872±0.00 N/A N/A 0.764±0.00 N/A N/A N/A N/A N/A
ENST00000479782 N/A N/A N/A N/A N/A 0.862±0.43 N/A 0.291±0.00 N/A N/A N/A 1.744±0.03 0.932±0.00 N/A
ENST00000483546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618533 0.518±0.00 1.334±0.00 N/A 0.448±0.08 0.792±0.18 0.665±0.00 0.333±0.18 0.591±0.00 1.375±0.00 0.551±0.06 0.557±0.47 1.882±1.27 1.429±0.45 2.120±0.52
ENSG00000153046 ENST00000328908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.785±0.41
ENST00000343762 0.695±0.00 2.603±0.00 N/A 2.219±0.35 N/A 2.774±1.84 0.471±0.00 3.750±0.00 N/A 1.937±0.00 0.581±0.00 2.507±0.96 8.632±0.41 N/A
ENST00000397588 5.921±0.00 2.525±0.00 1.113±0.00 4.183±0.00 2.210±0.38 2.267±0.89 2.315±0.00 2.184±0.00 1.442±0.15 5.478±0.00 3.239±2.09 4.697±3.07 7.743±6.06 3.529±0.27
ENST00000440139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449732 N/A N/A N/A N/A N/A N/A 0.409±0.00 N/A N/A N/A N/A 1.821±0.36 N/A N/A
ENST00000469671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483019 N/A N/A 1.472±0.00 19.170±0.00 7.885±0.00 4.500±0.00 1.309±0.00 3.761±0.00 7.481±0.00 4.982±0.00 N/A 6.219±0.00 N/A N/A
ENST00000491864 N/A N/A 1.889±0.00 5.707±0.00 N/A 7.881±0.00 3.804±0.00 6.939±0.00 11.942±0.00 2.250±0.00 3.854±0.00 14.481±0.00 N/A N/A
ENSG00000217030 ENST00000404109 N/A 0.033±0.00 N/A 0.035±0.00 0.101±0.00 0.031±0.00 N/A N/A N/A 0.032±0.00 0.324±0.00 0.057±0.00 N/A 0.043±0.01
ENSG00000236336 ENST00000436283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.545±0.30
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021418 ENSMUST00000171686 0.275±0.11 0.419±0.18 0.363±0.02 0.300±0.03 0.241±0.04 0.147±0.05 0.134±0.03 0.194±0.04 0.183±0.06 0.104±0.00 0.668±0.07 0.622±0.23 0.339±0.21 0.296±0.14
ENSMUST00000174230 4.109±0.65 4.597±0.61 2.381±0.51 1.082±0.33 2.795±0.56 1.553±0.57 1.639±0.35 3.407±0.40 3.203±0.65 1.592±0.23 2.812±0.43 5.181±1.94 4.177±2.79 1.958±0.86
ENSMUST00000174231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.784±0.00 N/A N/A
ENSMUST00000174852 0.355±0.11 0.333±0.00 0.311±0.03 0.254±0.06 0.429±0.13 0.250±0.08 0.120±0.01 N/A 0.226±0.05 0.146±0.01 0.197±0.05 0.529±0.22 0.343±0.20 0.199±0.07
ENSMUSG00000059288 ENSMUST00000075220 N/A 1.522±0.00 N/A 0.332±0.00 N/A N/A 0.195±0.01 N/A 0.296±0.12 0.617±0.00 0.134±0.01 0.596±0.00 N/A 34.170±8.19
ENSMUST00000163595 3.369±0.69 3.565±1.30 5.548±0.67 2.046±0.72 2.851±1.15 2.986±0.96 1.572±0.08 1.513±0.22 3.739±3.43 3.102±0.55 1.104±0.21 4.362±1.83 6.259±4.24 N/A

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