C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromodomain protein, Y-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343762 CDYL-003 ENSG00000153046 9606 + 6:4889992-4955551 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLungMuscleOvaryPlacentaENST00000343762
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Lung Muscle Ovary Placenta
ENST00000343762 0.695±0.00 2.603±0.00 2.219±0.35 2.774±1.84 0.471±0.00 3.750±0.00 1.937±0.00 0.581±0.00 2.507±0.96 8.632±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IM CIL_0003IM_0001 CGP 6:4115689-4955551
CIL_000162 CIL_000162_0002 CGP 6:4706159-5004063

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003714 IMP transcription corepressor activity
GO:0003824 IEA catalytic activity
GO:0004402 IEA histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007283 TAS spermatogenesis
GO:0008152 IEA metabolic process
GO:0016573 IEA histone acetylation
GO:0035064 IDA methylated histone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163595 Cdyl-202 protein_coding Mus_musculus 0 1794
ENSMUST00000075220 Cdyl-201 protein_coding Mus_musculus 0 1794
ENSMUST00000175829 Gm7584-001 processed_pseudogene Mus_musculus 0 983

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