C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003IM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198721-ENSG00000153046 CGP 9606 6:4115689-4955551
GeneTranscriptPositionBiotype
ENSG00000153046 (CDYL)
chromodomain protein, Y-like 		ENST00000328908 (CDYL-001) 4706159-4955547 protein_coding
ENST00000343762 (CDYL-003) 4889992-4955551 protein_coding
ENST00000397588 (CDYL-006) 4776435-4954256 protein_coding
ENST00000440139 (CDYL-009) 4772971-4943597 protein_coding
ENST00000449732 (CDYL-007) 4836098-4954373 protein_coding
ENST00000469671 (CDYL-011) 4928695-4943813 retained_intron
ENST00000472453 (CDYL-008) 4776442-4954510 processed_transcript
ENST00000483019 (CDYL-010) 4773041-4892347 processed_transcript
ENST00000491864 (CDYL-004) 4715841-4892112 processed_transcript
ENSG00000198721 (ECI2)
enoyl-CoA delta isomerase 2 		ENST00000361538 (ECI2-006) 4115706-4135597 protein_coding
ENST00000380118 (ECI2-003) 4115689-4135597 protein_coding
ENST00000380120 (ECI2-007) 4115702-4135590 nonsense_mediated_decay
ENST00000380125 (ECI2-001) 4115693-4135468 protein_coding
ENST00000464057 (ECI2-002) 4115706-4135575 retained_intron
ENST00000464583 (ECI2-004) 4115708-4133782 retained_intron
ENST00000465828 (ECI2-005) 4115707-4135557 protein_coding
ENST00000478266 (ECI2-010) 4115706-4135564 nonsense_mediated_decay
ENST00000489086 (ECI2-011) 4130318-4135573 retained_intron
ENST00000495548 (ECI2-009) 4127814-4135459 protein_coding
ENST00000496241 (ECI2-008) 4115700-4135591 nonsense_mediated_decay
ENSG00000205444 (KU-MEL-3)
uncharacterized LOC497048 		ENST00000380106 (KU-MEL-3-001) 4610656-4611304 lincRNA
ENSG00000216307 (RP3-400B16.2)
 ENST00000403917 (RP3-400B16.2-001) 4189116-4189806 processed_pseudogene
ENSG00000217385 (PSMC1P11)
proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 11 		ENST00000405257 (PSMC1P11-001) 4702463-4703779 processed_pseudogene
ENSG00000231811 (RP3-527G5.1)
 ENST00000437430 (RP3-527G5.1-001) 4345743-4347037 lincRNA
ENSG00000234817 (RP3-400B16.1)
 ENST00000427049 (RP3-400B16.1-001) 4136072-4157385 lincRNA
ENSG00000236336 (RP3-430A16.1)
 ENST00000436283 (RP3-430A16.1-001) 4774526-4775408 antisense
ENSG00000237716 (RP3-400B16.3)
 ENST00000427591 (RP3-400B16.3-001) 4186624-4188109 lincRNA
ENSG00000260239 (RP11-274H24.1)
 ENST00000563079 (RP11-274H24.1-002) 4491807-4495769 lincRNA
ENSG00000260673 (RP4-529N6.2)
 ENST00000568110 (RP4-529N6.2-001) 4599287-4602420 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003IM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021417-ENSMUSG00000059288 CGP 10090 13:34977748-35874064
GeneTranscriptPositionBiotype
ENSMUSG00000021417 (Eci2)
enoyl-Coenzyme A delta isomerase 2 		ENSMUST00000021854 (Eci2-003) 34977749-34994127 protein_coding
ENSMUST00000084345 (Eci2-012) 34985896-34988356 retained_intron
ENSMUST00000110251 (Eci2-002) 34977757-34994132 protein_coding
ENSMUST00000163280 (Eci2-007) 34986106-35027094 protein_coding
ENSMUST00000164421 (Eci2-009) 34980252-34989565 processed_transcript
ENSMUST00000166109 (Eci2-011) 34978702-34988822 processed_transcript
ENSMUST00000167036 (Eci2-005) 34986157-34994132 protein_coding
ENSMUST00000169759 (Eci2-010) 34990218-34993462 protein_coding
ENSMUST00000170538 (Eci2-008) 34986067-35027094 protein_coding
ENSMUST00000170989 (Eci2-004) 34986148-34994123 protein_coding
ENSMUST00000171229 (Eci2-001) 34977748-34994144 protein_coding
ENSMUST00000171258 (Eci2-006) 34987525-34994122 protein_coding
ENSMUST00000178421 (Eci2-201) 34977750-34994144 protein_coding
ENSMUSG00000059288 (Cdyl)
chromodomain protein, Y chromosome-like 		ENSMUST00000075220 (Cdyl-201) 35659862-35874064 protein_coding
ENSMUST00000163595 (Cdyl-202) 35741313-35874058 protein_coding
ENSMUSG00000102099 (RP24-80P7.1)
RIKEN cDNA 1700011B04 gene 		ENSMUST00000189140 (RP24-80P7.1-001) 35181623-35188017 lincRNA
ENSMUST00000189905 (RP24-80P7.1-002) 35180267-35182749 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IM_0001ENSG00000153046ENST00000328908ENST00000343762ENST00000397588ENST00000440139ENST00000449732ENST00000469671ENST00000472453ENST00000483019ENST00000491864ENSG00000198721ENST00000361538ENST00000380118ENST00000380120ENST00000380125ENST00000464057ENST00000464583ENST00000465828ENST00000478266ENST00000489086ENST00000495548ENST00000496241ENSG00000205444ENST00000380106ENSG00000216307ENST00000403917ENSG00000217385ENST00000405257ENSG00000231811ENST00000437430ENSG00000234817ENST00000427049ENSG00000236336ENST00000436283ENSG00000237716ENST00000427591ENSG00000260239ENST00000563079ENSG00000260673ENST00000568110CIL_0003IM_0002ENSMUSG00000021417ENSMUST00000021854ENSMUST00000084345ENSMUST00000110251ENSMUST00000163280ENSMUST00000164421ENSMUST00000166109ENSMUST00000167036ENSMUST00000169759ENSMUST00000170538ENSMUST00000170989ENSMUST00000171229ENSMUST00000171258ENSMUST00000178421ENSMUSG00000059288ENSMUST00000075220ENSMUST00000163595ENSMUSG00000102099ENSMUST00000189140ENSMUST00000189905
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IM_0001ENSG00000153046ENST00000328908ENST00000343762ENST00000397588ENST00000449732ENST00000483019ENST00000491864ENSG00000198721ENST00000361538ENST00000380118ENST00000380120ENST00000464057ENST00000464583ENST00000478266ENST00000489086ENST00000496241ENSG00000205444ENST00000380106ENSG00000216307ENST00000403917ENSG00000217385ENST00000405257ENSG00000231811ENST00000437430ENSG00000234817ENST00000427049ENSG00000236336ENST00000436283ENSG00000237716ENST00000427591ENSG00000260239ENST00000563079ENSG00000260673ENST00000568110CIL_0003IM_0002ENSMUSG00000021417ENSMUST00000021854ENSMUST00000110251ENSMUST00000164421ENSMUST00000166109ENSMUST00000167036ENSMUST00000170989ENSMUST00000171229ENSMUST00000178421ENSMUSG00000059288ENSMUST00000075220ENSMUST00000163595ENSMUSG00000102099ENSMUST00000189140ENSMUST00000189905
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153046 ENST00000328908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.785±0.41
ENST00000343762 0.695±0.00 2.603±0.00 N/A 2.219±0.35 N/A 2.774±1.84 0.471±0.00 3.750±0.00 N/A 1.937±0.00 0.581±0.00 2.507±0.96 8.632±0.41 N/A
ENST00000397588 5.921±0.00 2.525±0.00 1.113±0.00 4.183±0.00 2.210±0.38 2.267±0.89 2.315±0.00 2.184±0.00 1.442±0.15 5.478±0.00 3.239±2.09 4.697±3.07 7.743±6.06 3.529±0.27
ENST00000440139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449732 N/A N/A N/A N/A N/A N/A 0.409±0.00 N/A N/A N/A N/A 1.821±0.36 N/A N/A
ENST00000469671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483019 N/A N/A 1.472±0.00 19.170±0.00 7.885±0.00 4.500±0.00 1.309±0.00 3.761±0.00 7.481±0.00 4.982±0.00 N/A 6.219±0.00 N/A N/A
ENST00000491864 N/A N/A 1.889±0.00 5.707±0.00 N/A 7.881±0.00 3.804±0.00 6.939±0.00 11.942±0.00 2.250±0.00 3.854±0.00 14.481±0.00 N/A N/A
ENSG00000198721 ENST00000361538 15.352±0.00 9.231±0.00 6.887±0.00 3.293±1.73 11.042±8.64 10.698±4.26 20.329±0.00 21.266±1.77 12.102±10.96 10.619±0.00 28.844±22.56 14.022±5.74 10.745±4.63 12.386±0.00
ENST00000380118 16.286±0.00 4.493±0.00 3.419±0.00 5.755±3.49 4.437±2.45 5.514±3.18 13.095±6.27 29.443±1.84 6.249±2.78 3.035±0.09 17.533±6.94 12.412±5.28 12.432±4.24 N/A
ENST00000380120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.551±6.44
ENST00000380125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464057 N/A N/A N/A N/A 1.171±0.00 N/A N/A N/A 0.964±0.00 1.648±0.00 N/A N/A N/A N/A
ENST00000464583 N/A N/A 1.342±0.00 0.826±0.47 0.462±0.00 0.726±0.00 N/A N/A N/A 0.705±0.00 N/A 1.154±0.56 N/A N/A
ENST00000465828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.728±0.00 16.039±0.00 N/A
ENST00000489086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.222±0.00 N/A N/A
ENST00000495548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.981±0.00
ENSG00000205444 ENST00000380106 0.039±0.00 0.082±0.00 N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A 0.072±0.00 0.145±0.01 N/A
ENSG00000216307 ENST00000403917 N/A N/A N/A N/A N/A 0.860±0.00 0.049±0.00 0.027±0.00 N/A N/A N/A 0.075±0.00 N/A 0.494±0.16
ENSG00000217385 ENST00000405257 0.046±0.00 0.010±0.00 N/A 0.020±0.00 0.010±0.00 0.018±0.00 N/A N/A N/A 0.009±0.00 0.022±0.00 N/A 0.026±0.00 3.084±1.95
ENSG00000231811 ENST00000437430 0.284±0.00 N/A N/A N/A N/A 0.177±0.00 13.459±5.70 N/A N/A N/A N/A N/A 0.207±0.00 0.215±0.00
ENSG00000234817 ENST00000427049 0.137±0.00 0.068±0.00 0.020±0.00 0.070±0.00 0.100±0.00 0.070±0.05 0.102±0.06 0.079±0.00 0.032±0.01 0.063±0.01 0.045±0.00 0.086±0.03 0.039±0.02 0.376±0.05
ENSG00000236336 ENST00000436283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.545±0.30
ENSG00000237716 ENST00000427591 0.082±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.247±0.00 N/A 5.759±4.57
ENSG00000260239 ENST00000563079 0.043±0.00 0.103±0.00 N/A 0.061±0.00 0.117±0.00 0.024±0.00 0.029±0.00 0.071±0.00 N/A 0.053±0.00 0.006±0.00 0.019±0.01 0.175±0.04 0.103±0.03
ENSG00000260673 ENST00000568110 N/A 0.045±0.00 N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 0.075±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021417 ENSMUST00000021854 10.103±0.69 7.118±1.71 6.934±0.51 8.104±2.50 7.785±0.98 3.973±0.96 8.293±0.00 9.831±1.22 11.804±5.51 5.618±1.02 6.025±1.03 6.659±2.56 6.531±2.76 0.814±0.04
ENSMUST00000084345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110251 10.581±2.07 N/A 9.519±2.38 7.612±0.02 12.791±3.31 4.651±0.00 18.633±4.00 9.982±1.82 8.426±2.16 6.241±0.21 9.614±2.02 12.776±4.87 6.491±1.34 1.027±0.00
ENSMUST00000163280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164421 N/A N/A N/A N/A 61.618±0.00 N/A N/A N/A 52.392±4.41 N/A N/A N/A 19.125±0.00 N/A
ENSMUST00000166109 N/A N/A N/A N/A N/A 3.453±0.00 N/A N/A N/A N/A N/A 7.562±0.00 N/A 1.060±0.00
ENSMUST00000167036 N/A N/A N/A N/A 8.699±0.01 N/A N/A N/A 7.888±0.00 N/A N/A 7.136±0.00 N/A 1.267±0.16
ENSMUST00000169759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170989 N/A 24.320±1.32 N/A N/A 9.841±0.00 5.896±0.89 N/A N/A 20.535±4.41 5.497±0.00 N/A 8.700±3.73 N/A 1.332±0.00
ENSMUST00000171229 17.324±3.80 6.923±1.05 18.767±0.30 8.458±4.71 12.594±5.98 6.150±1.75 37.931±5.16 17.760±2.28 20.481±6.21 9.504±2.26 11.678±2.12 9.870±4.98 11.489±3.88 2.189±1.36
ENSMUST00000171258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178421 N/A N/A 8.994±0.00 N/A N/A 1.725±0.00 N/A N/A N/A N/A 4.771±0.60 6.059±1.17 6.105±0.00 0.886±0.15
ENSMUSG00000059288 ENSMUST00000075220 N/A 1.522±0.00 N/A 0.332±0.00 N/A N/A 0.195±0.01 N/A 0.296±0.12 0.617±0.00 0.134±0.01 0.596±0.00 N/A 34.170±8.19
ENSMUST00000163595 3.369±0.69 3.565±1.30 5.548±0.67 2.046±0.72 2.851±1.15 2.986±0.96 1.572±0.08 1.513±0.22 3.739±3.43 3.102±0.55 1.104±0.21 4.362±1.83 6.259±4.24 N/A
ENSMUSG00000102099 ENSMUST00000189140 N/A N/A N/A N/A 0.111±0.00 N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A 3.896±1.63
ENSMUST00000189905 N/A N/A N/A N/A N/A 0.064±0.00 0.036±0.00 N/A N/A N/A N/A N/A N/A 0.062±0.00

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