C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromodomain protein, Y chromosome-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000059288 Cdyl 10090 + 13:35659862-35874064 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075220 Cdyl-201 35659862-35874064 protein_coding
  ENSMUST00000163595 Cdyl-202 35741313-35874058 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075220ENSMUST00000163595
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075220 N/A 1.522±0.00 N/A 0.332±0.00 N/A N/A 0.195±0.01 N/A 0.296±0.12 0.617±0.00 0.134±0.01 0.596±0.00 N/A 34.170±8.19
ENSMUST00000163595 3.369±0.69 3.565±1.30 5.548±0.67 2.046±0.72 2.851±1.15 2.986±0.96 1.572±0.08 1.513±0.22 3.739±3.43 3.102±0.55 1.104±0.21 4.362±1.83 6.259±4.24 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IM CIL_0003IM_0002 CGP 13:34977748-35874064
CIL_000162 CIL_000162_0003 CGP 13:35659862-35906359

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003714 ISS transcription corepressor activity
GO:0004402 IEA histone acetyltransferase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016573 IEA histone acetylation
GO:0035064 ISS methylated histone binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038985 cdyl chromodomain protein, Y-like protein_coding Danio_rerio
ENSG00000153046 CDYL chromodomain protein, Y-like protein_coding Homo_sapiens

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