C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400093 ATP5J-002 ENSG00000154723 9606 - 21:25724480-25735673 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R8 CIL_0000R8_0001 CGP 21:25585656-25717562
CIL_0000ML CIL_0000ML_0002 CGP 21:25639272-25735673
CIL_0000RF CIL_0000RF_0001 CGP 21:25716503-25772460

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000276 IEA mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005215 NAS transporter activity
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005753 IDA mitochondrial proton-transporting ATP synthase complex
GO:0006200 IDA ATP catabolic process
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0016887 IDA ATPase activity
GO:0021762 IEP substantia nigra development
GO:0022857 IC transmembrane transporter activity
GO:0022904 TAS respiratory electron transport chain
GO:0042776 IC mitochondrial ATP synthesis coupled proton transport
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127651 Atp5j-004 retained_intron Mus_musculus 0 217
ENSMUST00000140036 Atp5j-005 processed_transcript Mus_musculus 0 195
ENSMUST00000114184 Gabpa-002 protein_coding Mus_musculus 2e-25 121

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